Analysis of interatomic Contacts of Structural Units in PDB entry:
4GWO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GWO entry

There are 2 chains in PDB entry 4GWO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 86LYS 324
B
 GLU 86LYS 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 4GWO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
100 107Right-handed alpha
Helix 2
2
A
108 119Right-handed alpha
Helix 3
3
A
130 140Right-handed alpha
Helix 4
4
A
151 155Right-handed 310
Helix 5
5
A
176 181Right-handed 310
Helix 6
6
A
185 190Right-handed alpha
Helix 7
7
A
203 214Right-handed alpha
Helix 8
8
A
226 236Right-handed alpha
Helix 9
9
A
246 248Right-handed 310
Helix 10
10
A
281 292Right-handed alpha
Helix 11
11
A
296 306Right-handed alpha
Helix 12
12
A
308 317Right-handed alpha
Helix 13
13
B
100 107Right-handed alpha
Helix 14
14
B
108 119Right-handed alpha
Helix 15
15
B
130 140Right-handed alpha
Helix 16
16
B
151 155Right-handed 310
Helix 17
17
B
176 181Right-handed 310
Helix 18
18
B
185 190Right-handed alpha
Helix 19
19
B
203 214Right-handed alpha
Helix 20
20
B
226 236Right-handed alpha
Helix 21
21
B
246 248Right-handed 310
Helix 22
22
B
281 292Right-handed alpha
Helix 23
23
B
296 306Right-handed alpha
Helix 24
24
B
308 317Right-handed alpha
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There are 2 sheets in PDB entry 4GWO. Click on sheet of interest to get list of strands forming it: A, B,

There are 11 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 324first strand
Strand 2
A
158 166parallel
Strand 3
A
268 275anti-parallel
Strand 4
A
145 148anti-parallel
Strand 5
A
93 99parallel
Strand 6
A
122 128parallel
Strand 7
B
219 224parallel
Strand 8
B
193 197parallel
Strand 9
B
240 244parallel
Strand 10
B
168 172anti-parallel
Strand 11
B
257 260anti-parallel
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There are 11 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 260first strand
Strand 2
A
168 172anti-parallel
Strand 3
A
240 244anti-parallel
Strand 4
A
193 197parallel
Strand 5
A
219 224parallel
Strand 6
B
122 128parallel
Strand 7
B
93 99parallel
Strand 8
B
145 148parallel
Strand 9
B
268 274anti-parallel
Strand 10
B
159 166anti-parallel
Strand 11
B
323 324parallel
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