Analysis of interatomic Contacts of Structural Units in PDB entry:
4GYO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GYO entry

There are 4 chains in PDB entry 4GYO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 6ARG 371
B
 SER 7ARG 371
C
 GLU 1THR 5
D
 GLU 1THR 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 38 helices in PDB entry 4GYO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 23Right-handed alpha
Helix 2
2
A
25 41Right-handed alpha
Helix 3
3
A
46 68Right-handed alpha
Helix 4
4
A
79 88Right-handed alpha
Helix 5
5
A
95 112Right-handed alpha
Helix 6
6
A
114 127Right-handed alpha
Helix 7
7
A
128 132Right-handed 310
Helix 8
8
A
134 152Right-handed alpha
Helix 9
9
A
154 172Right-handed alpha
Helix 10
10
A
176 193Right-handed alpha
Helix 11
11
A
195 214Right-handed alpha
Helix 12
12
A
215 234Right-handed alpha
Helix 13
13
A
235 253Right-handed alpha
Helix 14
14
A
256 273Right-handed alpha
Helix 15
15
A
274 292Right-handed alpha
Helix 16
16
A
294 309Right-handed alpha
Helix 17
17
A
313 327Right-handed alpha
Helix 18
18
A
329 347Right-handed alpha
Helix 19
19
A
349 370Right-handed alpha
Helix 20
20
B
8 23Right-handed alpha
Helix 21
21
B
25 42Right-handed alpha
Helix 22
22
B
46 68Right-handed alpha
Helix 23
23
B
79 88Right-handed alpha
Helix 24
24
B
95 112Right-handed alpha
Helix 25
25
B
114 127Right-handed alpha
Helix 26
26
B
128 132Right-handed 310
Helix 27
27
B
134 152Right-handed alpha
Helix 28
28
B
154 172Right-handed alpha
Helix 29
29
B
176 193Right-handed alpha
Helix 30
30
B
195 214Right-handed alpha
Helix 31
31
B
215 234Right-handed alpha
Helix 32
32
B
235 253Right-handed alpha
Helix 33
33
B
256 273Right-handed alpha
Helix 34
34
B
274 292Right-handed alpha
Helix 35
35
B
294 309Right-handed alpha
Helix 36
36
B
313 327Right-handed alpha
Helix 37
37
B
329 347Right-handed alpha
Helix 38
38
B
349 370Right-handed alpha
Back to top of page
There are no sheets in PDB entry 4GYO
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il