Analysis of interatomic Contacts of Structural Units in PDB entry:
4GYT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GYT entry

There are 2 chains in PDB entry 4GYT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 7GLU 183
B
 SER 7GLU 183
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4GYT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 21Right-handed alpha
Helix 2
2
A
22 24Right-handed 310
Helix 3
3
A
28 42Right-handed alpha
Helix 4
4
A
44 55Right-handed alpha
Helix 5
5
A
61 84Right-handed alpha
Helix 6
6
A
99 121Right-handed alpha
Helix 7
7
A
124 128Right-handed 310
Helix 8
8
A
130 144Right-handed alpha
Helix 9
9
A
154 182Right-handed alpha
Helix 10
10
B
12 20Right-handed alpha
Helix 11
11
B
21 24Right-handed 310
Helix 12
12
B
28 43Right-handed alpha
Helix 13
13
B
44 55Right-handed alpha
Helix 14
14
B
61 84Right-handed alpha
Helix 15
15
B
99 121Right-handed alpha
Helix 16
16
B
124 128Right-handed 310
Helix 17
17
B
130 145Right-handed alpha
Helix 18
18
B
154 181Right-handed alpha
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There are no sheets in PDB entry 4GYT
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il