Analysis of interatomic Contacts of Structural Units in PDB entry:
4GZ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GZ3 entry

There are 3 chains in PDB entry 4GZ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 314LYS 1028
B
 TYR 13MET 26
C
 ALA 336ARG 904
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 79 helices in PDB entry 4GZ3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
314 331Right-handed alpha
Helix 2
2
A
332 347Right-handed alpha
Helix 3
3
A
350 365Right-handed alpha
Helix 4
4
A
366 381Right-handed alpha
Helix 5
5
A
384 398Right-handed alpha
Helix 6
6
A
400 415Right-handed alpha
Helix 7
7
A
418 432Right-handed alpha
Helix 8
8
A
434 449Right-handed alpha
Helix 9
9
A
452 466Right-handed alpha
Helix 10
10
A
471 489Right-handed alpha
Helix 11
11
A
498 503Right-handed 310
Helix 12
12
A
506 527Right-handed alpha
Helix 13
13
A
558 565Right-handed alpha
Helix 14
14
A
566 571Right-handed alpha
Helix 15
15
A
589 599Right-handed alpha
Helix 16
16
A
606 608Right-handed 310
Helix 17
17
A
610 621Right-handed alpha
Helix 18
18
A
638 643Right-handed alpha
Helix 19
19
A
675 682Right-handed 310
Helix 20
20
A
697 702Right-handed alpha
Helix 21
21
A
703 706Right-handed 310
Helix 22
22
A
730 737Right-handed alpha
Helix 23
23
A
770 783Right-handed alpha
Helix 24
24
A
799 804Right-handed alpha
Helix 25
25
A
804 809Right-handed alpha
Helix 26
26
A
823 825Right-handed 310
Helix 27
27
A
839 843Right-handed 310
Helix 28
28
A
844 858Right-handed alpha
Helix 29
29
A
869 871Right-handed 310
Helix 30
30
A
872 883Right-handed alpha
Helix 31
31
A
886 888Right-handed 310
Helix 32
32
A
897 905Right-handed alpha
Helix 33
33
A
906 908Right-handed 310
Helix 34
34
A
920 929Right-handed alpha
Helix 35
35
A
940 943Right-handed 310
Helix 36
36
A
944 954Right-handed alpha
Helix 37
37
A
955 959Right-handed 310
Helix 38
38
A
962 976Right-handed alpha
Helix 39
39
A
976 994Right-handed alpha
Helix 40
40
A
998 1019Right-handed alpha
Helix 41
41
C
337 347Right-handed alpha
Helix 42
42
C
350 364Right-handed alpha
Helix 43
43
C
366 381Right-handed alpha
Helix 44
44
C
384 398Right-handed alpha
Helix 45
45
C
400 415Right-handed alpha
Helix 46
46
C
418 432Right-handed alpha
Helix 47
47
C
434 449Right-handed alpha
Helix 48
48
C
452 466Right-handed alpha
Helix 49
49
C
471 489Right-handed alpha
Helix 50
50
C
498 503Right-handed 310
Helix 51
51
C
506 527Right-handed alpha
Helix 52
52
C
558 565Right-handed alpha
Helix 53
53
C
566 571Right-handed alpha
Helix 54
54
C
589 599Right-handed alpha
Helix 55
55
C
606 608Right-handed 310
Helix 56
56
C
610 621Right-handed alpha
Helix 57
57
C
638 643Right-handed alpha
Helix 58
58
C
675 682Right-handed 310
Helix 59
59
C
697 702Right-handed alpha
Helix 60
60
C
703 706Right-handed 310
Helix 61
61
C
730 737Right-handed alpha
Helix 62
62
C
770 783Right-handed alpha
Helix 63
63
C
799 804Right-handed alpha
Helix 64
64
C
804 809Right-handed alpha
Helix 65
65
C
823 826Right-handed 310
Helix 66
66
C
839 843Right-handed 310
Helix 67
67
C
844 858Right-handed alpha
Helix 68
68
C
869 871Right-handed 310
Helix 69
69
C
872 883Right-handed alpha
Helix 70
70
C
886 888Right-handed 310
Helix 71
71
C
897 905Right-handed alpha
Helix 72
72
C
906 908Right-handed 310
Helix 73
73
C
920 929Right-handed alpha
Helix 74
74
C
940 943Right-handed 310
Helix 75
75
C
944 954Right-handed alpha
Helix 76
76
C
955 959Right-handed 310
Helix 77
77
C
962 976Right-handed alpha
Helix 78
78
C
976 994Right-handed alpha
Helix 79
79
C
998 1019Right-handed alpha
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There are 6 sheets in PDB entry 4GZ3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
601 604first strand
Strand 2
A
576 582parallel
Strand 3
A
546 552parallel
Strand 4
A
625 628parallel
Strand 5
A
648 651parallel
Strand 6
A
666 669parallel
Strand 7
A
685 688parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
742 744first strand
Strand 2
A
764 767anti-parallel
Strand 3
A
709 711parallel
Strand 4
A
724 727anti-parallel
Strand 5
A
817 821anti-parallel
Strand 6
A
792 796parallel
Strand 7
A
786 789anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
890 893first strand
Strand 2
A
861 866parallel
Strand 3
A
832 835parallel
Strand 4
A
910 912parallel
Strand 5
A
933 934parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
601 604first strand
Strand 2
C
576 582parallel
Strand 3
C
546 552parallel
Strand 4
C
625 628parallel
Strand 5
C
648 651parallel
Strand 6
C
666 669parallel
Strand 7
C
685 688parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
742 744first strand
Strand 2
C
764 767anti-parallel
Strand 3
C
709 711parallel
Strand 4
C
724 727anti-parallel
Strand 5
C
817 821anti-parallel
Strand 6
C
792 796parallel
Strand 7
C
786 789anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
890 893first strand
Strand 2
C
861 866parallel
Strand 3
C
832 835parallel
Strand 4
C
910 912parallel
Strand 5
C
933 934parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il