Analysis of interatomic Contacts of Structural Units in PDB entry:
4GZ6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4GZ6 entry

There are 2 chains in PDB entry 4GZ6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 313	LYS 1028
B	CYS 313	VAL 895

There are157 helices in PDB entry 4GZ6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	316	331	Right-handed alpha
Helix 2	2	A	332	347	Right-handed alpha
Helix 3	3	A	350	364	Right-handed alpha
Helix 4	4	A	366	381	Right-handed alpha
Helix 5	5	A	384	398	Right-handed alpha
Helix 6	6	A	400	415	Right-handed alpha
Helix 7	7	A	418	432	Right-handed alpha
Helix 8	8	A	434	449	Right-handed alpha
Helix 9	9	A	452	466	Right-handed alpha
Helix 10	10	A	471	489	Right-handed alpha
Helix 11	11	A	496	503	Right-handed 310
Helix 12	12	A	506	527	Right-handed alpha
Helix 13	13	A	558	565	Right-handed alpha
Helix 14	14	A	566	571	Right-handed 310
Helix 15	15	A	589	599	Right-handed alpha
Helix 16	16	A	606	608	Right-handed 310
Helix 17	17	A	610	621	Right-handed alpha
Helix 18	18	A	638	643	Right-handed alpha
Helix 19	19	A	675	682	Right-handed 310
Helix 20	20	A	697	702	Right-handed alpha
Helix 21	21	A	703	706	Right-handed 310
Helix 22	22	A	730	737	Right-handed alpha
Helix 23	23	A	770	783	Right-handed alpha
Helix 24	24	A	799	804	Right-handed alpha
Helix 25	25	A	804	809	Right-handed alpha
Helix 26	26	A	823	826	Right-handed 310
Helix 27	27	A	839	843	Right-handed 310
Helix 28	28	A	844	858	Right-handed alpha
Helix 29	29	A	869	871	Right-handed 310
Helix 30	30	A	872	884	Right-handed alpha
Helix 31	31	A	886	888	Right-handed 310
Helix 32	32	A	897	904	Right-handed alpha
Helix 33	33	A	905	908	Right-handed 310
Helix 34	34	A	920	929	Right-handed alpha
Helix 35	35	A	940	943	Right-handed 310
Helix 36	36	A	944	954	Right-handed alpha
Helix 37	37	A	955	959	Right-handed 310
Helix 38	38	A	962	976	Right-handed alpha
Helix 39	39	A	976	994	Right-handed alpha
Helix 40	40	A	998	1019	Right-handed alpha
Helix 41	41	B	315	330	Right-handed alpha
Helix 42	42	B	332	347	Right-handed alpha
Helix 43	43	B	350	364	Right-handed alpha
Helix 44	44	B	366	381	Right-handed alpha
Helix 45	45	B	384	398	Right-handed alpha
Helix 46	46	B	400	415	Right-handed alpha
Helix 47	47	B	419	432	Right-handed alpha
Helix 48	48	B	434	449	Right-handed alpha
Helix 49	49	B	452	466	Right-handed alpha
Helix 50	50	B	471	489	Right-handed alpha
Helix 51	51	B	499	503	Right-handed 310
Helix 52	52	B	506	526	Right-handed alpha
Helix 53	53	B	558	565	Right-handed alpha
Helix 54	54	B	567	571	Right-handed 310
Helix 55	55	B	589	599	Right-handed alpha
Helix 56	56	B	606	608	Right-handed 310
Helix 57	57	B	610	621	Right-handed alpha
Helix 58	58	B	638	643	Right-handed alpha
Helix 59	59	B	675	682	Right-handed 310
Helix 60	60	B	697	702	Right-handed alpha
Helix 61	61	B	703	706	Right-handed 310
Helix 62	62	B	730	736	Right-handed alpha
Helix 63	63	B	770	783	Right-handed alpha
Helix 64	64	B	799	804	Right-handed alpha
Helix 65	65	B	804	809	Right-handed alpha
Helix 66	66	B	823	825	Right-handed 310
Helix 67	67	B	839	843	Right-handed 310
Helix 68	68	B	844	858	Right-handed alpha
Helix 69	69	B	871	882	Right-handed alpha
Helix 70	70	B	886	888	Right-handed 310
Helix 71	71	B	897	905	Right-handed alpha
Helix 72	72	B	906	908	Right-handed 310
Helix 73	73	B	920	929	Right-handed alpha
Helix 74	74	B	940	943	Right-handed 310
Helix 75	75	B	944	954	Right-handed alpha
Helix 76	76	B	955	959	Right-handed 310
Helix 77	77	B	962	976	Right-handed alpha
Helix 78	78	B	976	994	Right-handed alpha
Helix 79	79	B	998	1019	Right-handed alpha
Helix 80	80	C	315	330	Right-handed alpha
Helix 81	81	C	332	347	Right-handed alpha
Helix 82	82	C	350	364	Right-handed alpha
Helix 83	83	C	366	381	Right-handed alpha
Helix 84	84	C	384	398	Right-handed alpha
Helix 85	85	C	400	415	Right-handed alpha
Helix 86	86	C	418	432	Right-handed alpha
Helix 87	87	C	434	449	Right-handed alpha
Helix 88	88	C	452	466	Right-handed alpha
Helix 89	89	C	471	489	Right-handed alpha
Helix 90	90	C	496	500	Right-handed 310
Helix 91	91	C	506	526	Right-handed alpha
Helix 92	92	C	558	565	Right-handed alpha
Helix 93	93	C	566	571	Right-handed 310
Helix 94	94	C	589	599	Right-handed alpha
Helix 95	95	C	606	608	Right-handed 310
Helix 96	96	C	610	622	Right-handed alpha
Helix 97	97	C	638	643	Right-handed alpha
Helix 98	98	C	675	682	Right-handed 310
Helix 99	99	C	697	702	Right-handed alpha
Helix 100	100	C	703	706	Right-handed 310
Helix 101	101	C	730	736	Right-handed alpha
Helix 102	102	C	770	783	Right-handed alpha
Helix 103	103	C	799	804	Right-handed alpha
Helix 104	104	C	804	809	Right-handed alpha
Helix 105	105	C	823	825	Right-handed 310
Helix 106	106	C	839	843	Right-handed 310
Helix 107	107	C	844	858	Right-handed alpha
Helix 108	108	C	869	871	Right-handed 310
Helix 109	109	C	872	882	Right-handed alpha
Helix 110	110	C	886	888	Right-handed 310
Helix 111	111	C	897	904	Right-handed alpha
Helix 112	112	C	905	908	Right-handed 310
Helix 113	113	C	920	929	Right-handed alpha
Helix 114	114	C	940	943	Right-handed 310
Helix 115	115	C	944	954	Right-handed alpha
Helix 116	116	C	955	959	Right-handed 310
Helix 117	117	C	962	976	Right-handed alpha
Helix 118	118	C	976	994	Right-handed alpha
Helix 119	119	C	998	1019	Right-handed alpha
Helix 120	120	D	315	330	Right-handed alpha
Helix 121	121	D	332	347	Right-handed alpha
Helix 122	122	D	350	365	Right-handed alpha
Helix 123	123	D	366	381	Right-handed alpha
Helix 124	124	D	384	398	Right-handed alpha
Helix 125	125	D	400	415	Right-handed alpha
Helix 126	126	D	418	433	Right-handed alpha
Helix 127	127	D	434	449	Right-handed alpha
Helix 128	128	D	452	466	Right-handed alpha
Helix 129	129	D	471	489	Right-handed alpha
Helix 130	130	D	506	526	Right-handed alpha
Helix 131	131	D	558	565	Right-handed alpha
Helix 132	132	D	567	571	Right-handed 310
Helix 133	133	D	589	599	Right-handed alpha
Helix 134	134	D	606	608	Right-handed 310
Helix 135	135	D	610	621	Right-handed alpha
Helix 136	136	D	638	643	Right-handed alpha
Helix 137	137	D	675	682	Right-handed 310
Helix 138	138	D	697	702	Right-handed alpha
Helix 139	139	D	703	706	Right-handed 310
Helix 140	140	D	730	737	Right-handed alpha
Helix 141	141	D	770	783	Right-handed alpha
Helix 142	142	D	799	804	Right-handed alpha
Helix 143	143	D	804	809	Right-handed alpha
Helix 144	144	D	823	825	Right-handed 310
Helix 145	145	D	839	843	Right-handed 310
Helix 146	146	D	844	858	Right-handed alpha
Helix 147	147	D	871	883	Right-handed alpha
Helix 148	148	D	886	888	Right-handed 310
Helix 149	149	D	897	904	Right-handed alpha
Helix 150	150	D	905	908	Right-handed 310
Helix 151	151	D	920	929	Right-handed alpha
Helix 152	152	D	940	943	Right-handed 310
Helix 153	153	D	944	954	Right-handed alpha
Helix 154	154	D	955	959	Right-handed 310
Helix 155	155	D	962	976	Right-handed alpha
Helix 156	156	D	976	994	Right-handed alpha
Helix 157	157	D	998	1019	Right-handed alpha

There are 12 sheets in PDB entry 4GZ6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	601	604	first strand
Strand 2	A	576	582	parallel
Strand 3	A	546	552	parallel
Strand 4	A	625	628	parallel
Strand 5	A	648	652	parallel
Strand 6	A	666	670	parallel
Strand 7	A	685	689	parallel

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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	742	745	first strand
Strand 2	A	763	767	anti-parallel
Strand 3	A	709	711	parallel
Strand 4	A	724	727	anti-parallel
Strand 5	A	817	821	anti-parallel
Strand 6	A	792	796	parallel
Strand 7	A	786	789	anti-parallel

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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	890	893	first strand
Strand 2	A	861	866	parallel
Strand 3	A	832	835	parallel
Strand 4	A	910	912	parallel
Strand 5	A	933	934	parallel

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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	601	604	first strand
Strand 2	B	576	582	parallel
Strand 3	B	546	552	parallel
Strand 4	B	625	628	parallel
Strand 5	B	648	651	parallel
Strand 6	B	666	670	parallel
Strand 7	B	685	689	parallel

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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	742	745	first strand
Strand 2	B	763	767	anti-parallel
Strand 3	B	709	711	parallel
Strand 4	B	724	727	anti-parallel
Strand 5	B	817	821	anti-parallel
Strand 6	B	792	796	parallel
Strand 7	B	786	789	anti-parallel

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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	890	893	first strand
Strand 2	B	861	866	parallel
Strand 3	B	832	836	parallel
Strand 4	B	910	912	parallel
Strand 5	B	933	934	parallel

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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	601	604	first strand
Strand 2	C	576	582	parallel
Strand 3	C	546	552	parallel
Strand 4	C	625	628	parallel
Strand 5	C	648	652	parallel
Strand 6	C	666	670	parallel
Strand 7	C	685	689	parallel

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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	742	745	first strand
Strand 2	C	763	767	anti-parallel
Strand 3	C	709	711	parallel
Strand 4	C	724	727	anti-parallel
Strand 5	C	817	821	anti-parallel
Strand 6	C	792	796	parallel
Strand 7	C	786	789	anti-parallel

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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	890	893	first strand
Strand 2	C	861	866	parallel
Strand 3	C	832	836	parallel
Strand 4	C	910	912	parallel
Strand 5	C	933	934	parallel

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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	601	604	first strand
Strand 2	D	576	582	parallel
Strand 3	D	546	552	parallel
Strand 4	D	625	628	parallel
Strand 5	D	648	652	parallel
Strand 6	D	666	670	parallel
Strand 7	D	685	689	parallel

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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	742	745	first strand
Strand 2	D	763	767	anti-parallel
Strand 3	D	709	711	parallel
Strand 4	D	724	727	anti-parallel
Strand 5	D	817	821	anti-parallel
Strand 6	D	792	796	parallel
Strand 7	D	786	789	anti-parallel

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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	890	893	first strand
Strand 2	D	861	866	parallel
Strand 3	D	832	835	parallel
Strand 4	D	910	912	parallel
Strand 5	D	933	934	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4GZ6

Analysis of interatomic Contacts of Structural Units in PDB entry:
4GZ6