Analysis of interatomic Contacts of Structural Units in PDB entry:
4GZB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GZB entry

There is 1 chain in PDB entry 4GZB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3LEU 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 4GZB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 6Right-handed 310
Helix 2
2
A
7 24Right-handed alpha
Helix 3
3
A
65 80Right-handed alpha
Helix 4
4
A
88 97Right-handed 310
Helix 5
5
A
99 103Right-handed 310
Helix 6
6
A
105 111Right-handed alpha
Helix 7
7
A
128 139Right-handed alpha
Helix 8
8
A
152 167Right-handed alpha
Helix 9
9
A
170 178Right-handed alpha
Helix 10
10
A
178 183Right-handed alpha
Helix 11
11
A
193 200Right-handed 310
Helix 12
12
A
206 208Right-handed 310
Helix 13
13
A
218 224Right-handed alpha
Helix 14
14
A
229 241Right-handed alpha
Helix 15
15
A
242 245Right-handed 310
Helix 16
16
A
246 255Right-handed alpha
Helix 17
17
A
280 288Right-handed alpha
Helix 18
18
A
289 295Right-handed alpha
Helix 19
19
A
331 333Right-handed 310
Helix 20
20
A
346 364Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 4GZB. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
37 47anti-parallel
Strand 3
A
27 34anti-parallel
Strand 4
A
335 341anti-parallel
Strand 5
A
324 330anti-parallel
Strand 6
A
312 319anti-parallel
Strand 7
A
273 276anti-parallel
Strand 8
A
266 268anti-parallel
Strand 9
A
258 263anti-parallel
Strand 10
A
300 307anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
226 228anti-parallel
Strand 3
A
188 189anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 149first strand
Strand 2
A
297 298anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 204first strand
Strand 2
A
210 211anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il