Analysis of interatomic Contacts of Structural Units in PDB entry:
4GZE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GZE entry

There are 3 chains in PDB entry 4GZE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0GLU 478
B
 THR 2GLU 478
C
 THR 2ASN 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are108 helices in PDB entry 4GZE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 24Right-handed alpha
Helix 2
2
A
28 32Right-handed 310
Helix 3
3
A
68 84Right-handed alpha
Helix 4
4
A
93 98Right-handed alpha
Helix 5
5
A
107 123Right-handed alpha
Helix 6
6
A
138 146Right-handed alpha
Helix 7
7
A
147 151Right-handed 310
Helix 8
8
A
152 168Right-handed alpha
Helix 9
9
A
182 186Right-handed 310
Helix 10
10
A
189 198Right-handed alpha
Helix 11
11
A
206 233Right-handed alpha
Helix 12
12
A
253 277Right-handed alpha
Helix 13
13
A
280 290Right-handed alpha
Helix 14
14
A
297 307Right-handed alpha
Helix 15
15
A
331 335Right-handed alpha
Helix 16
16
A
352 368Right-handed alpha
Helix 17
17
A
392 412Right-handed alpha
Helix 18
18
A
460 472Right-handed alpha
Helix 19
19
B
19 24Right-handed alpha
Helix 20
20
B
28 32Right-handed 310
Helix 21
21
B
36 40Right-handed 310
Helix 22
22
B
68 84Right-handed alpha
Helix 23
23
B
93 98Right-handed alpha
Helix 24
24
B
107 123Right-handed alpha
Helix 25
25
B
138 146Right-handed alpha
Helix 26
26
B
147 151Right-handed 310
Helix 27
27
B
152 168Right-handed alpha
Helix 28
28
B
182 186Right-handed 310
Helix 29
29
B
189 198Right-handed alpha
Helix 30
30
B
206 233Right-handed alpha
Helix 31
31
B
253 277Right-handed alpha
Helix 32
32
B
280 290Right-handed alpha
Helix 33
33
B
297 307Right-handed alpha
Helix 34
34
B
352 368Right-handed alpha
Helix 35
35
B
392 412Right-handed alpha
Helix 36
36
B
460 472Right-handed alpha
Helix 37
37
C
19 24Right-handed alpha
Helix 38
38
C
28 32Right-handed 310
Helix 39
39
C
61 65Right-handed 310
Helix 40
40
C
68 84Right-handed alpha
Helix 41
41
C
93 98Right-handed alpha
Helix 42
42
C
107 124Right-handed alpha
Helix 43
43
C
138 146Right-handed alpha
Helix 44
44
C
147 151Right-handed 310
Helix 45
45
C
152 168Right-handed alpha
Helix 46
46
C
180 186Right-handed 310
Helix 47
47
C
189 198Right-handed alpha
Helix 48
48
C
206 233Right-handed alpha
Helix 49
49
C
253 277Right-handed alpha
Helix 50
50
C
280 290Right-handed alpha
Helix 51
51
C
297 307Right-handed alpha
Helix 52
52
C
352 368Right-handed alpha
Helix 53
53
C
392 412Right-handed alpha
Helix 54
54
C
460 472Right-handed alpha
Helix 55
55
D
19 24Right-handed alpha
Helix 56
56
D
28 32Right-handed 310
Helix 57
57
D
61 65Right-handed 310
Helix 58
58
D
68 84Right-handed alpha
Helix 59
59
D
93 98Right-handed alpha
Helix 60
60
D
107 124Right-handed alpha
Helix 61
61
D
138 146Right-handed alpha
Helix 62
62
D
147 150Right-handed 310
Helix 63
63
D
151 168Right-handed alpha
Helix 64
64
D
182 186Right-handed 310
Helix 65
65
D
189 198Right-handed alpha
Helix 66
66
D
206 233Right-handed alpha
Helix 67
67
D
253 268Right-handed alpha
Helix 68
68
D
268 277Right-handed alpha
Helix 69
69
D
280 290Right-handed alpha
Helix 70
70
D
297 307Right-handed alpha
Helix 71
71
D
353 368Right-handed alpha
Helix 72
72
D
392 412Right-handed alpha
Helix 73
73
D
460 472Right-handed alpha
Helix 74
74
E
19 24Right-handed alpha
Helix 75
75
E
28 32Right-handed 310
Helix 76
76
E
68 84Right-handed alpha
Helix 77
77
E
93 98Right-handed alpha
Helix 78
78
E
107 124Right-handed alpha
Helix 79
79
E
138 146Right-handed alpha
Helix 80
80
E
147 151Right-handed 310
Helix 81
81
E
152 168Right-handed alpha
Helix 82
82
E
180 186Right-handed 310
Helix 83
83
E
189 198Right-handed alpha
Helix 84
84
E
206 233Right-handed alpha
Helix 85
85
E
253 277Right-handed alpha
Helix 86
86
E
280 290Right-handed alpha
Helix 87
87
E
297 307Right-handed alpha
Helix 88
88
E
352 368Right-handed alpha
Helix 89
89
E
392 412Right-handed alpha
Helix 90
90
E
460 472Right-handed alpha
Helix 91
91
F
19 24Right-handed alpha
Helix 92
92
F
28 32Right-handed 310
Helix 93
93
F
68 84Right-handed alpha
Helix 94
94
F
93 98Right-handed alpha
Helix 95
95
F
107 124Right-handed alpha
Helix 96
96
F
138 144Right-handed alpha
Helix 97
97
F
146 151Right-handed 310
Helix 98
98
F
152 168Right-handed alpha
Helix 99
99
F
182 186Right-handed 310
Helix 100
100
F
189 198Right-handed alpha
Helix 101
101
F
206 233Right-handed alpha
Helix 102
102
F
253 277Right-handed alpha
Helix 103
103
F
280 290Right-handed alpha
Helix 104
104
F
297 307Right-handed alpha
Helix 105
105
F
331 335Right-handed alpha
Helix 106
106
F
352 368Right-handed alpha
Helix 107
107
F
392 412Right-handed alpha
Helix 108
108
F
460 472Right-handed alpha
Back to top of page

There are 18 sheets in PDB entry 4GZE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 17first strand
Strand 2
A
87 91parallel
Strand 3
A
127 133parallel
Strand 4
A
174 178parallel
Strand 5
A
237 243parallel
Strand 6
A
311 315parallel
Strand 7
A
371 375parallel
Strand 8
A
417 420parallel
Strand 9
A
13 17parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 249first strand
Strand 2
A
320 322parallel
Strand 3
A
336 337anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
443 445first strand
Strand 2
A
457 459anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 17first strand
Strand 2
B
87 91parallel
Strand 3
B
127 133parallel
Strand 4
B
174 178parallel
Strand 5
B
237 243parallel
Strand 6
B
311 315parallel
Strand 7
B
371 375parallel
Strand 8
B
417 420parallel
Strand 9
B
13 17parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 249first strand
Strand 2
B
320 322parallel
Strand 3
B
336 337anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
443 445first strand
Strand 2
B
457 459anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
13 17first strand
Strand 2
C
87 91parallel
Strand 3
C
127 133parallel
Strand 4
C
174 178parallel
Strand 5
C
237 243parallel
Strand 6
C
312 315parallel
Strand 7
C
371 375parallel
Strand 8
C
417 420parallel
Strand 9
C
13 17parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
247 249first strand
Strand 2
C
320 322parallel
Strand 3
C
336 337anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
443 445first strand
Strand 2
C
457 459anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
13 17first strand
Strand 2
D
87 91parallel
Strand 3
D
127 133parallel
Strand 4
D
174 178parallel
Strand 5
D
237 243parallel
Strand 6
D
312 315parallel
Strand 7
D
371 375parallel
Strand 8
D
417 420parallel
Strand 9
D
13 17parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
247 249first strand
Strand 2
D
320 322parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
443 445first strand
Strand 2
D
457 459anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
13 17first strand
Strand 2
E
87 91parallel
Strand 3
E
127 133parallel
Strand 4
E
174 178parallel
Strand 5
E
237 243parallel
Strand 6
E
311 315parallel
Strand 7
E
371 375parallel
Strand 8
E
417 420parallel
Strand 9
E
13 17parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
247 249first strand
Strand 2
E
320 322parallel
Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
443 445first strand
Strand 2
E
457 459anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
13 17first strand
Strand 2
F
87 91parallel
Strand 3
F
127 133parallel
Strand 4
F
174 178parallel
Strand 5
F
237 243parallel
Strand 6
F
312 315parallel
Strand 7
F
371 375parallel
Strand 8
F
417 420parallel
Strand 9
F
13 17parallel
Back to list of sheets
Back to top of page

There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
247 249first strand
Strand 2
F
320 322parallel
Strand 3
F
336 337anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
443 445first strand
Strand 2
F
457 459anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il