Analysis of interatomic Contacts of Structural Units in PDB entry:
4GZV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GZV entry

There are 8 chains in PDB entry 4GZV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 25ARG 163
B
 ALA 31ARG 163
C
 PHE 28ARG 163
D
 ALA 31ARG 163
E
 GLN 23ARG 163
F
 PHE 28ARG 163
G
 PHE 28ARG 163
H
 PHE 28ARG 163
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 4GZV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 30Right-handed 310
Helix 2
2
A
105 109Right-handed 310
Helix 3
3
B
105 109Right-handed 310
Helix 4
4
C
105 109Right-handed 310
Helix 5
5
D
105 109Right-handed 310
Helix 6
6
E
105 109Right-handed 310
Helix 7
7
F
105 109Right-handed 310
Helix 8
8
G
105 109Right-handed 310
Helix 9
9
H
105 109Right-handed 310
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There are 4 sheets in PDB entry 4GZV. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 18 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 44first strand
Strand 2
A
52 62anti-parallel
Strand 3
A
67 72anti-parallel
Strand 4
A
80 91anti-parallel
Strand 5
A
94 102anti-parallel
Strand 6
A
111 120anti-parallel
Strand 7
A
124 133anti-parallel
Strand 8
A
139 150anti-parallel
Strand 9
A
35 44anti-parallel
Strand 10
B
35 44anti-parallel
Strand 11
B
139 150anti-parallel
Strand 12
B
124 133anti-parallel
Strand 13
B
111 120anti-parallel
Strand 14
B
94 102anti-parallel
Strand 15
B
80 91anti-parallel
Strand 16
B
67 72anti-parallel
Strand 17
B
52 62anti-parallel
Strand 18
B
35 44anti-parallel
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There are 18 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 44first strand
Strand 2
C
52 62anti-parallel
Strand 3
C
67 72anti-parallel
Strand 4
C
80 91anti-parallel
Strand 5
C
94 102anti-parallel
Strand 6
C
111 120anti-parallel
Strand 7
C
124 133anti-parallel
Strand 8
C
139 150anti-parallel
Strand 9
C
35 44anti-parallel
Strand 10
D
35 44anti-parallel
Strand 11
D
139 150anti-parallel
Strand 12
D
124 133anti-parallel
Strand 13
D
111 120anti-parallel
Strand 14
D
94 102anti-parallel
Strand 15
D
80 91anti-parallel
Strand 16
D
67 72anti-parallel
Strand 17
D
52 62anti-parallel
Strand 18
D
35 44anti-parallel
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There are 18 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
35 44first strand
Strand 2
E
52 62anti-parallel
Strand 3
E
67 72anti-parallel
Strand 4
E
80 91anti-parallel
Strand 5
E
94 102anti-parallel
Strand 6
E
111 120anti-parallel
Strand 7
E
124 133anti-parallel
Strand 8
E
139 150anti-parallel
Strand 9
E
35 44anti-parallel
Strand 10
H
35 44anti-parallel
Strand 11
H
142 150anti-parallel
Strand 12
H
124 131anti-parallel
Strand 13
H
111 120anti-parallel
Strand 14
H
94 102anti-parallel
Strand 15
H
80 91anti-parallel
Strand 16
H
67 72anti-parallel
Strand 17
H
52 62anti-parallel
Strand 18
H
35 44anti-parallel
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There are 18 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
35 44first strand
Strand 2
F
52 62anti-parallel
Strand 3
F
67 72anti-parallel
Strand 4
F
80 91anti-parallel
Strand 5
F
94 102anti-parallel
Strand 6
F
111 120anti-parallel
Strand 7
F
124 134anti-parallel
Strand 8
F
139 150anti-parallel
Strand 9
F
35 44anti-parallel
Strand 10
G
35 44anti-parallel
Strand 11
G
139 150anti-parallel
Strand 12
G
124 133anti-parallel
Strand 13
G
111 120anti-parallel
Strand 14
G
94 102anti-parallel
Strand 15
G
80 91anti-parallel
Strand 16
G
67 72anti-parallel
Strand 17
G
52 62anti-parallel
Strand 18
G
35 44anti-parallel
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