Analysis of interatomic Contacts of Structural Units in PDB entry:
4H05


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H05 entry

There are 2 chains in PDB entry 4H05 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -2PHE 267
B
 HIS -3PHE 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 4H05. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-1 12Right-handed alpha
Helix 2
2
A
47 66Right-handed alpha
Helix 3
3
A
102 119Right-handed alpha
Helix 4
4
A
121 125Right-handed 310
Helix 5
5
A
130 144Right-handed alpha
Helix 6
6
A
148 152Right-handed 310
Helix 7
7
A
153 157Right-handed 310
Helix 8
8
A
160 172Right-handed alpha
Helix 9
9
A
186 188Right-handed 310
Helix 10
10
A
213 225Right-handed alpha
Helix 11
11
A
233 246Right-handed alpha
Helix 12
12
A
253 265Right-handed alpha
Helix 13
13
B
-2 12Right-handed alpha
Helix 14
14
B
23 27Right-handed 310
Helix 15
15
B
49 65Right-handed alpha
Helix 16
16
B
99 119Right-handed alpha
Helix 17
17
B
121 125Right-handed 310
Helix 18
18
B
130 144Right-handed alpha
Helix 19
19
B
160 171Right-handed alpha
Helix 20
20
B
186 188Right-handed 310
Helix 21
21
B
213 225Right-handed alpha
Helix 22
22
B
233 247Right-handed alpha
Helix 23
23
B
253 265Right-handed alpha
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There are 6 sheets in PDB entry 4H05. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 21first strand
Strand 2
A
29 34anti-parallel
Strand 3
A
37 46anti-parallel
Strand 4
A
80 87anti-parallel
Strand 5
A
72 77anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
A
190 192anti-parallel
Strand 3
A
199 202anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 181first strand
Strand 2
A
209 212anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 20first strand
Strand 2
B
28 33anti-parallel
Strand 3
B
38 44anti-parallel
Strand 4
B
82 87anti-parallel
Strand 5
B
72 77anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 93first strand
Strand 2
B
190 192anti-parallel
Strand 3
B
199 202anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 181first strand
Strand 2
B
209 212anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il