Analysis of interatomic Contacts of Structural Units in PDB entry:
4H09

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4H09 entry

There are 4 chains in PDB entry 4H09 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 0	ILE 405
B	GLY 0	TYR 403
C	GLY 0	GLY 404
D	GLY 0	TYR 242

There are 10 helices in PDB entry 4H09. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	66	70	Right-handed 310
Helix 2	2	A	72	79	Right-handed 310
Helix 3	3	B	66	70	Right-handed 310
Helix 4	4	B	72	79	Right-handed 310
Helix 5	5	C	66	70	Right-handed 310
Helix 6	6	C	72	79	Right-handed 310
Helix 7	7	D	66	70	Right-handed 310
Helix 8	8	D	72	79	Right-handed 310
Helix 9	9	E	66	70	Right-handed 310
Helix 10	10	E	72	79	Right-handed 310

There are 37 sheets in PDB entry 4H09. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	38	first strand
Strand 2	A	43	48	anti-parallel
Strand 3	A	52	57	anti-parallel
Strand 4	A	81	84	parallel
Strand 5	A	104	107	parallel
Strand 6	A	126	129	parallel

Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	60	first strand
Strand 2	A	88	91	parallel
Strand 3	A	113	114	parallel
Strand 4	A	135	136	parallel
Strand 5	A	157	158	parallel
Strand 6	A	179	180	parallel

Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	148	150	first strand
Strand 2	A	170	173	parallel
Strand 3	A	193	196	parallel

Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	206	first strand
Strand 2	A	209	212	anti-parallel
Strand 3	A	217	220	anti-parallel
Strand 4	A	238	239	parallel
Strand 5	A	261	262	parallel
Strand 6	A	284	285	parallel

Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	231	first strand
Strand 2	A	252	254	parallel

Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	278	first strand
Strand 2	A	298	301	parallel
Strand 3	A	321	324	parallel
Strand 4	A	345	347	parallel

Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	307	308	first strand
Strand 2	A	331	332	parallel
Strand 3	A	354	355	parallel
Strand 4	A	377	378	parallel

Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	396	397	first strand
Strand 2	A	403	404	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	38	first strand
Strand 2	B	43	48	anti-parallel
Strand 3	B	52	57	anti-parallel
Strand 4	B	81	84	parallel
Strand 5	B	104	107	parallel
Strand 6	B	126	129	parallel

Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	59	60	first strand
Strand 2	B	88	91	parallel
Strand 3	B	113	114	parallel
Strand 4	B	135	136	parallel
Strand 5	B	157	158	parallel
Strand 6	B	179	180	parallel

Back to list of sheets
Back to top of page

There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	150	first strand
Strand 2	B	170	173	parallel
Strand 3	B	193	196	parallel

Back to list of sheets
Back to top of page

There are 6 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	206	first strand
Strand 2	B	209	212	anti-parallel
Strand 3	B	217	220	anti-parallel
Strand 4	B	238	239	parallel
Strand 5	B	261	262	parallel
Strand 6	B	284	285	parallel

Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	231	first strand
Strand 2	B	252	254	parallel

Back to list of sheets
Back to top of page

There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	278	first strand
Strand 2	B	298	301	parallel
Strand 3	B	321	324	parallel
Strand 4	B	345	347	parallel

Back to list of sheets
Back to top of page

There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	307	308	first strand
Strand 2	B	331	332	parallel
Strand 3	B	354	355	parallel
Strand 4	B	377	378	parallel

Back to list of sheets
Back to top of page

There are 6 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	38	first strand
Strand 2	C	43	48	anti-parallel
Strand 3	C	52	57	anti-parallel
Strand 4	C	81	84	parallel
Strand 5	C	104	107	parallel
Strand 6	C	126	129	parallel

Back to list of sheets
Back to top of page

There are 6 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	60	first strand
Strand 2	C	88	91	parallel
Strand 3	C	113	114	parallel
Strand 4	C	135	136	parallel
Strand 5	C	157	158	parallel
Strand 6	C	179	180	parallel

Back to list of sheets
Back to top of page

There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	148	150	first strand
Strand 2	C	170	173	parallel
Strand 3	C	193	196	parallel

Back to list of sheets
Back to top of page

There are 6 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	203	206	first strand
Strand 2	C	209	212	anti-parallel
Strand 3	C	217	220	anti-parallel
Strand 4	C	238	239	parallel
Strand 5	C	261	262	parallel
Strand 6	C	284	285	parallel

Back to list of sheets
Back to top of page

There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	231	first strand
Strand 2	C	252	254	parallel

Back to list of sheets
Back to top of page

There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	275	278	first strand
Strand 2	C	298	301	parallel
Strand 3	C	321	324	parallel
Strand 4	C	345	347	parallel

Back to list of sheets
Back to top of page

There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	307	308	first strand
Strand 2	C	331	332	parallel
Strand 3	C	354	355	parallel
Strand 4	C	377	378	parallel

Back to list of sheets
Back to top of page

There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	396	397	first strand
Strand 2	C	403	404	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	38	first strand
Strand 2	D	43	48	anti-parallel
Strand 3	D	52	57	anti-parallel
Strand 4	D	81	84	parallel
Strand 5	D	104	107	parallel
Strand 6	D	126	129	parallel

Back to list of sheets
Back to top of page

There are 6 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	59	60	first strand
Strand 2	D	88	91	parallel
Strand 3	D	113	114	parallel
Strand 4	D	135	136	parallel
Strand 5	D	157	158	parallel
Strand 6	D	179	180	parallel

Back to list of sheets
Back to top of page

There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	150	first strand
Strand 2	D	170	173	parallel
Strand 3	D	193	196	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	203	206	first strand
Strand 2	D	209	212	anti-parallel
Strand 3	D	217	220	anti-parallel
Strand 4	D	238	239	parallel
Strand 5	D	261	262	parallel
Strand 6	D	284	285	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	229	231	first strand
Strand 2	D	252	254	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	275	278	first strand
Strand 2	D	298	301	parallel
Strand 3	D	321	324	parallel
Strand 4	D	345	347	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	307	308	first strand
Strand 2	D	331	332	parallel
Strand 3	D	354	355	parallel
Strand 4	D	377	378	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	38	first strand
Strand 2	E	43	47	anti-parallel
Strand 3	E	52	57	anti-parallel
Strand 4	E	81	84	parallel
Strand 5	E	104	107	parallel
Strand 6	E	126	129	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	59	60	first strand
Strand 2	E	88	91	parallel
Strand 3	E	113	114	parallel
Strand 4	E	135	136	parallel
Strand 5	E	157	158	parallel
Strand 6	E	179	180	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	148	150	first strand
Strand 2	E	170	173	parallel
Strand 3	E	193	196	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	203	206	first strand
Strand 2	E	209	212	anti-parallel
Strand 3	E	217	220	anti-parallel
Strand 4	E	238	239	parallel
Strand 5	E	261	262	parallel
Strand 6	E	284	285	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	229	231	first strand
Strand 2	E	252	254	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	275	278	first strand
Strand 2	E	298	301	parallel
Strand 3	E	321	324	parallel
Strand 4	E	345	347	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	307	308	first strand
Strand 2	E	331	332	parallel
Strand 3	E	354	355	parallel
Strand 4	E	377	378	parallel
Strand 5	E	403	404	anti-parallel
Strand 6	E	396	397	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4H09

Analysis of interatomic Contacts of Structural Units in PDB entry:
4H09