Analysis of interatomic Contacts of Structural Units in PDB entry:
4H0C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H0C entry

There are 2 chains in PDB entry 4H0C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -2LYS 207
B
 ASN -1LYS 207
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 4H0C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 37Right-handed alpha
Helix 2
2
A
38 41Right-handed 310
Helix 3
3
A
54 58Right-handed 310
Helix 4
4
A
67 72Right-handed 310
Helix 5
5
A
73 92Right-handed alpha
Helix 6
6
A
95 97Right-handed 310
Helix 7
7
A
105 118Right-handed alpha
Helix 8
8
A
138 142Right-handed 310
Helix 9
9
A
163 177Right-handed alpha
Helix 10
10
A
194 204Right-handed alpha
Helix 11
11
B
14 18Right-handed 310
Helix 12
12
B
31 37Right-handed alpha
Helix 13
13
B
38 41Right-handed 310
Helix 14
14
B
54 58Right-handed 310
Helix 15
15
B
67 72Right-handed 310
Helix 16
16
B
73 92Right-handed alpha
Helix 17
17
B
95 97Right-handed 310
Helix 18
18
B
105 118Right-handed alpha
Helix 19
19
B
138 142Right-handed 310
Helix 20
20
B
163 177Right-handed alpha
Helix 21
21
B
194 203Right-handed alpha
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There are 2 sheets in PDB entry 4H0C. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 12first strand
Strand 2
A
47 52anti-parallel
Strand 3
A
20 25parallel
Strand 4
A
99 104parallel
Strand 5
A
124 128parallel
Strand 6
A
150 157parallel
Strand 7
A
180 187parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 12first strand
Strand 2
B
47 52anti-parallel
Strand 3
B
20 25parallel
Strand 4
B
99 104parallel
Strand 5
B
124 128parallel
Strand 6
B
150 157parallel
Strand 7
B
180 187parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il