Analysis of interatomic Contacts of Structural Units in PDB entry:
4H0R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H0R entry

There are 2 chains in PDB entry 4H0R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 260
B
 MET 1ILE 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 4H0R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 18Right-handed alpha
Helix 2
2
A
42 44Right-handed 310
Helix 3
3
A
54 68Right-handed alpha
Helix 4
4
A
72 78Right-handed alpha
Helix 5
5
A
96 103Right-handed alpha
Helix 6
6
A
113 125Right-handed alpha
Helix 7
7
A
140 144Right-handed 310
Helix 8
8
A
176 195Right-handed alpha
Helix 9
9
A
215 224Right-handed alpha
Helix 10
10
A
245 247Right-handed 310
Helix 11
11
B
5 18Right-handed alpha
Helix 12
12
B
42 44Right-handed 310
Helix 13
13
B
54 68Right-handed alpha
Helix 14
14
B
72 77Right-handed alpha
Helix 15
15
B
83 87Right-handed 310
Helix 16
16
B
96 104Right-handed alpha
Helix 17
17
B
113 125Right-handed alpha
Helix 18
18
B
137 144Right-handed 310
Helix 19
19
B
176 196Right-handed alpha
Helix 20
20
B
215 224Right-handed alpha
Helix 21
21
B
245 247Right-handed 310
Back to top of page

There are 5 sheets in PDB entry 4H0R. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 21first strand
Strand 2
A
29 40anti-parallel
Strand 3
A
198 212anti-parallel
Strand 4
A
161 172parallel
Strand 5
A
150 158anti-parallel
Strand 6
A
132 134anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 105first strand
Strand 2
A
111 112anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 235first strand
Strand 2
A
249 252anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 21first strand
Strand 2
B
29 40anti-parallel
Strand 3
B
198 212anti-parallel
Strand 4
B
161 172parallel
Strand 5
B
150 158anti-parallel
Strand 6
B
132 134anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
232 235first strand
Strand 2
B
249 252anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il