Analysis of interatomic Contacts of Structural Units in PDB entry:
4H1I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H1I entry

There are 4 chains in PDB entry 4H1I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 26THR 306
B
 PRO 26THR 306
C
 PRO 26THR 306
D
 PRO 26THR 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 41 helices in PDB entry 4H1I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 44Right-handed alpha
Helix 2
2
A
80 94Right-handed alpha
Helix 3
3
A
98 103Right-handed alpha
Helix 4
4
A
109 113Right-handed 310
Helix 5
5
A
116 121Right-handed alpha
Helix 6
6
A
134 141Right-handed alpha
Helix 7
7
A
159 171Right-handed alpha
Helix 8
8
A
186 190Right-handed 310
Helix 9
9
A
221 241Right-handed alpha
Helix 10
10
A
261 271Right-handed alpha
Helix 11
11
B
30 44Right-handed alpha
Helix 12
12
B
80 93Right-handed alpha
Helix 13
13
B
97 103Right-handed alpha
Helix 14
14
B
110 113Right-handed 310
Helix 15
15
B
114 122Right-handed alpha
Helix 16
16
B
134 141Right-handed alpha
Helix 17
17
B
159 171Right-handed alpha
Helix 18
18
B
183 190Right-handed 310
Helix 19
19
B
221 241Right-handed alpha
Helix 20
20
B
261 270Right-handed alpha
Helix 21
21
B
292 294Right-handed 310
Helix 22
22
C
29 44Right-handed alpha
Helix 23
23
C
80 93Right-handed alpha
Helix 24
24
C
97 103Right-handed alpha
Helix 25
25
C
118 122Right-handed 310
Helix 26
26
C
134 141Right-handed alpha
Helix 27
27
C
159 171Right-handed alpha
Helix 28
28
C
222 241Right-handed alpha
Helix 29
29
C
261 269Right-handed alpha
Helix 30
30
C
287 291Right-handed 310
Helix 31
31
C
292 294Right-handed 310
Helix 32
32
D
29 44Right-handed alpha
Helix 33
33
D
80 93Right-handed alpha
Helix 34
34
D
98 103Right-handed alpha
Helix 35
35
D
114 122Right-handed alpha
Helix 36
36
D
135 142Right-handed alpha
Helix 37
37
D
161 171Right-handed alpha
Helix 38
38
D
183 187Right-handed 310
Helix 39
39
D
221 241Right-handed alpha
Helix 40
40
D
261 269Right-handed alpha
Helix 41
41
D
292 294Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 4H1I. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 48first strand
Strand 2
A
54 66anti-parallel
Strand 3
A
244 258anti-parallel
Strand 4
A
207 218parallel
Strand 5
A
198 204anti-parallel
Strand 6
A
178 180anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 281first strand
Strand 2
A
296 299anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 48first strand
Strand 2
B
54 66anti-parallel
Strand 3
B
244 258anti-parallel
Strand 4
B
207 218parallel
Strand 5
B
196 204anti-parallel
Strand 6
B
178 180anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
278 281first strand
Strand 2
B
296 299anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 48first strand
Strand 2
C
54 66anti-parallel
Strand 3
C
244 258anti-parallel
Strand 4
C
207 218parallel
Strand 5
C
196 204anti-parallel
Strand 6
C
178 180anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
278 281first strand
Strand 2
C
296 299anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
45 48first strand
Strand 2
D
54 66anti-parallel
Strand 3
D
244 258anti-parallel
Strand 4
D
207 218parallel
Strand 5
D
196 204anti-parallel
Strand 6
D
178 180anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
278 281first strand
Strand 2
D
296 299anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il