Analysis of interatomic Contacts of Structural Units in PDB entry:
4H1T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H1T entry

There are 6 chains in PDB entry 4H1T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3LYS 253
B
 LYS 3LYS 253
C
 LYS 3LYS 253
D
 LYS 3LEU 252
E
 LYS 3LYS 253
F
 LYS 3LEU 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 4H1T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 16Right-handed 310
Helix 2
2
A
26 28Right-handed 310
Helix 3
3
A
29 35Right-handed alpha
Helix 4
4
A
69 83Right-handed alpha
Helix 5
5
A
117 122Right-handed 310
Helix 6
6
A
132 146Right-handed alpha
Helix 7
7
A
162 166Right-handed 310
Helix 8
8
A
176 180Right-handed 310
Helix 9
9
A
181 189Right-handed alpha
Helix 10
10
A
197 207Right-handed alpha
Helix 11
11
A
229 252Right-handed alpha
Helix 12
12
B
12 16Right-handed 310
Helix 13
13
B
28 35Right-handed alpha
Helix 14
14
B
69 83Right-handed alpha
Helix 15
15
B
117 122Right-handed 310
Helix 16
16
B
132 146Right-handed alpha
Helix 17
17
B
162 166Right-handed 310
Helix 18
18
B
176 180Right-handed 310
Helix 19
19
B
181 189Right-handed alpha
Helix 20
20
B
197 207Right-handed alpha
Helix 21
21
B
232 253Right-handed alpha
Helix 22
22
C
12 16Right-handed 310
Helix 23
23
C
28 35Right-handed alpha
Helix 24
24
C
69 83Right-handed alpha
Helix 25
25
C
117 122Right-handed 310
Helix 26
26
C
132 146Right-handed alpha
Helix 27
27
C
162 166Right-handed 310
Helix 28
28
C
176 180Right-handed 310
Helix 29
29
C
181 189Right-handed alpha
Helix 30
30
C
197 207Right-handed alpha
Helix 31
31
C
232 252Right-handed alpha
Helix 32
32
D
12 16Right-handed 310
Helix 33
33
D
28 35Right-handed alpha
Helix 34
34
D
69 83Right-handed alpha
Helix 35
35
D
117 122Right-handed 310
Helix 36
36
D
132 146Right-handed alpha
Helix 37
37
D
162 166Right-handed 310
Helix 38
38
D
176 180Right-handed 310
Helix 39
39
D
181 189Right-handed alpha
Helix 40
40
D
197 207Right-handed alpha
Helix 41
41
D
229 252Right-handed alpha
Helix 42
42
E
12 16Right-handed 310
Helix 43
43
E
26 28Right-handed 310
Helix 44
44
E
29 35Right-handed alpha
Helix 45
45
E
69 83Right-handed alpha
Helix 46
46
E
117 122Right-handed 310
Helix 47
47
E
132 146Right-handed alpha
Helix 48
48
E
162 166Right-handed 310
Helix 49
49
E
176 180Right-handed 310
Helix 50
50
E
181 189Right-handed alpha
Helix 51
51
E
197 207Right-handed alpha
Helix 52
52
E
229 252Right-handed alpha
Helix 53
53
F
12 16Right-handed 310
Helix 54
54
F
28 35Right-handed alpha
Helix 55
55
F
69 83Right-handed alpha
Helix 56
56
F
117 122Right-handed 310
Helix 57
57
F
132 146Right-handed alpha
Helix 58
58
F
162 166Right-handed 310
Helix 59
59
F
176 180Right-handed 310
Helix 60
60
F
181 189Right-handed alpha
Helix 61
61
F
197 207Right-handed alpha
Helix 62
62
F
232 252Right-handed alpha
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There are 6 sheets in PDB entry 4H1T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 46first strand
Strand 2
A
49 56anti-parallel
Strand 3
A
59 64anti-parallel
Strand 4
A
20 23parallel
Strand 5
A
87 96parallel
Strand 6
A
211 221parallel
Strand 7
A
106 115anti-parallel
Strand 8
A
150 158parallel
Strand 9
A
193 195parallel
Strand 10
A
87 96anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 46first strand
Strand 2
B
49 56anti-parallel
Strand 3
B
59 64anti-parallel
Strand 4
B
20 24parallel
Strand 5
B
87 96parallel
Strand 6
B
211 221parallel
Strand 7
B
106 115anti-parallel
Strand 8
B
150 158parallel
Strand 9
B
193 195parallel
Strand 10
B
87 96anti-parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 46first strand
Strand 2
C
49 56anti-parallel
Strand 3
C
59 64anti-parallel
Strand 4
C
20 24parallel
Strand 5
C
87 96parallel
Strand 6
C
211 221parallel
Strand 7
C
106 115anti-parallel
Strand 8
C
150 158parallel
Strand 9
C
193 195parallel
Strand 10
C
87 96anti-parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
38 46first strand
Strand 2
D
49 56anti-parallel
Strand 3
D
59 64anti-parallel
Strand 4
D
20 24parallel
Strand 5
D
87 96parallel
Strand 6
D
211 221parallel
Strand 7
D
106 115anti-parallel
Strand 8
D
150 158parallel
Strand 9
D
193 195parallel
Strand 10
D
87 96anti-parallel
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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
38 46first strand
Strand 2
E
49 56anti-parallel
Strand 3
E
59 64anti-parallel
Strand 4
E
20 23parallel
Strand 5
E
87 96parallel
Strand 6
E
211 221parallel
Strand 7
E
106 115anti-parallel
Strand 8
E
150 158parallel
Strand 9
E
193 195parallel
Strand 10
E
87 96anti-parallel
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There are 10 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
38 46first strand
Strand 2
F
49 56anti-parallel
Strand 3
F
59 64anti-parallel
Strand 4
F
20 24parallel
Strand 5
F
87 96parallel
Strand 6
F
211 221parallel
Strand 7
F
106 115anti-parallel
Strand 8
F
150 158parallel
Strand 9
F
193 195parallel
Strand 10
F
87 96anti-parallel
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