Analysis of interatomic Contacts of Structural Units in PDB entry:
4H1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H1V entry

There is 1 chain in PDB entry 4H1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1THR 733
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4H1V. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
4 15Right-handed alpha
Helix 2
2
A
20 24Right-handed 310
Helix 3
3
A
37 47Right-handed alpha
Helix 4
4
A
103 115Right-handed alpha
Helix 5
5
A
154 158Right-handed 310
Helix 6
6
A
162 175Right-handed alpha
Helix 7
7
A
190 193Right-handed 310
Helix 8
8
A
194 201Right-handed alpha
Helix 9
9
A
216 220Right-handed 310
Helix 10
10
A
226 232Right-handed alpha
Helix 11
11
A
248 254Right-handed alpha
Helix 12
12
A
257 273Right-handed alpha
Helix 13
13
A
276 280Right-handed 310
Helix 14
14
A
281 323Right-handed alpha
Helix 15
15
A
708 729Right-handed alpha
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There are 2 sheets in PDB entry 4H1V. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
90 93first strand
Strand 2
A
130 136anti-parallel
Strand 3
A
63 69parallel
Strand 4
A
142 146anti-parallel
Strand 5
A
27 32parallel
Strand 6
A
179 186parallel
Strand 7
A
210 215parallel
Strand 8
A
241 243parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
76 77first strand
Strand 2
A
86 87anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il