Analysis of interatomic Contacts of Structural Units in PDB entry:
4H5F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H5F entry

There are 4 chains in PDB entry 4H5F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 30VAL 269
B
 GLN 30VAL 269
C
 GLN 30VAL 269
D
 SER 31VAL 269
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 4H5F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 40Right-handed alpha
Helix 2
2
A
67 80Right-handed alpha
Helix 3
3
A
90 92Right-handed 310
Helix 4
4
A
93 100Right-handed alpha
Helix 5
5
A
113 118Right-handed alpha
Helix 6
6
A
138 140Right-handed 310
Helix 7
7
A
145 150Right-handed alpha
Helix 8
8
A
160 170Right-handed alpha
Helix 9
9
A
180 190Right-handed alpha
Helix 10
10
A
200 210Right-handed alpha
Helix 11
11
A
236 254Right-handed alpha
Helix 12
12
A
254 266Right-handed alpha
Helix 13
13
B
32 40Right-handed alpha
Helix 14
14
B
67 81Right-handed alpha
Helix 15
15
B
90 100Right-handed alpha
Helix 16
16
B
113 118Right-handed alpha
Helix 17
17
B
138 140Right-handed 310
Helix 18
18
B
145 151Right-handed alpha
Helix 19
19
B
160 170Right-handed alpha
Helix 20
20
B
180 190Right-handed alpha
Helix 21
21
B
200 210Right-handed alpha
Helix 22
22
B
236 254Right-handed alpha
Helix 23
23
B
254 265Right-handed alpha
Helix 24
24
C
31 40Right-handed alpha
Helix 25
25
C
67 81Right-handed alpha
Helix 26
26
C
90 92Right-handed 310
Helix 27
27
C
93 100Right-handed alpha
Helix 28
28
C
115 118Right-handed 310
Helix 29
29
C
138 141Right-handed 310
Helix 30
30
C
146 151Right-handed alpha
Helix 31
31
C
160 170Right-handed alpha
Helix 32
32
C
180 190Right-handed alpha
Helix 33
33
C
200 210Right-handed alpha
Helix 34
34
C
236 253Right-handed alpha
Helix 35
35
C
254 266Right-handed alpha
Helix 36
36
D
32 40Right-handed alpha
Helix 37
37
D
67 81Right-handed alpha
Helix 38
38
D
90 92Right-handed 310
Helix 39
39
D
93 100Right-handed alpha
Helix 40
40
D
113 118Right-handed alpha
Helix 41
41
D
146 151Right-handed alpha
Helix 42
42
D
160 170Right-handed alpha
Helix 43
43
D
180 185Right-handed alpha
Helix 44
44
D
185 190Right-handed alpha
Helix 45
45
D
200 210Right-handed alpha
Helix 46
46
D
236 254Right-handed alpha
Helix 47
47
D
254 264Right-handed alpha
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There are 16 sheets in PDB entry 4H5F. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 88first strand
Strand 2
A
41 46parallel
Strand 3
A
105 106parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
64 66anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 122first strand
Strand 2
A
231 233anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 178first strand
Strand 2
A
153 157parallel
Strand 3
A
195 199parallel
Strand 4
A
131 136anti-parallel
Strand 5
A
213 215anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 88first strand
Strand 2
B
41 46parallel
Strand 3
B
105 106parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 58first strand
Strand 2
B
63 66anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 122first strand
Strand 2
B
231 233anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
175 178first strand
Strand 2
B
154 157parallel
Strand 3
B
195 199parallel
Strand 4
B
131 136anti-parallel
Strand 5
B
213 215anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
83 88first strand
Strand 2
C
41 46parallel
Strand 3
C
105 106parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
49 50first strand
Strand 2
C
54 59anti-parallel
Strand 3
C
62 66anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
120 122first strand
Strand 2
C
231 233anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
175 178first strand
Strand 2
C
154 157parallel
Strand 3
C
195 199parallel
Strand 4
C
131 136anti-parallel
Strand 5
C
213 215anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
83 88first strand
Strand 2
D
41 46parallel
Strand 3
D
105 106parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
49 50first strand
Strand 2
D
54 59anti-parallel
Strand 3
D
62 66anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
120 122first strand
Strand 2
D
231 233anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
174 178first strand
Strand 2
D
153 157parallel
Strand 3
D
195 199parallel
Strand 4
D
131 136anti-parallel
Strand 5
D
213 215anti-parallel
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