Analysis of interatomic Contacts of Structural Units in PDB entry:
4H5Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H5Y entry

There is 1 chain in PDB entry 4H5Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 60GLN 594
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 4H5Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
63 73Right-handed alpha
Helix 2
2
A
87 92Right-handed 310
Helix 3
3
A
95 104Right-handed alpha
Helix 4
4
A
116 125Right-handed alpha
Helix 5
5
A
129 154Right-handed alpha
Helix 6
6
A
157 181Right-handed alpha
Helix 7
7
A
191 245Right-handed alpha
Helix 8
8
A
249 256Right-handed alpha
Helix 9
9
A
261 286Right-handed alpha
Helix 10
10
A
289 318Right-handed alpha
Helix 11
11
A
333 337Right-handed 310
Helix 12
12
A
361 366Right-handed alpha
Helix 13
13
A
368 414Right-handed alpha
Helix 14
14
A
417 449Right-handed alpha
Helix 15
15
A
464 468Right-handed 310
Helix 16
16
A
509 514Right-handed alpha
Helix 17
17
A
516 529Right-handed alpha
Helix 18
18
A
530 534Right-handed 310
Helix 19
19
A
537 593Right-handed alpha
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There are 5 sheets in PDB entry 4H5Y. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 324first strand
Strand 2
A
339 342anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 350first strand
Strand 2
A
353 358anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 462first strand
Strand 2
A
452 455anti-parallel
Strand 3
A
470 473anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
476 480first strand
Strand 2
A
485 489anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 497first strand
Strand 2
A
500 505anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il