Analysis of interatomic Contacts of Structural Units in PDB entry:
4H62


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H62 entry

There are 3 chains in PDB entry 4H62 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
K
 GLN 93PRO 111
V
 ASP 100THR 121
Q
 HIS 383GLN 684
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 4H62. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
K
93 110Right-handed alpha
Helix 2
2
V
101 117Right-handed alpha
Helix 3
3
Q
425 450Right-handed alpha
Helix 4
4
Q
451 455Right-handed 310
Helix 5
5
Q
497 525Right-handed alpha
Helix 6
6
Q
534 539Right-handed alpha
Helix 7
7
Q
541 566Right-handed alpha
Helix 8
8
Q
596 605Right-handed alpha
Helix 9
9
Q
606 611Right-handed alpha
Helix 10
10
Q
666 681Right-handed alpha
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There are 2 sheets in PDB entry 4H62. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
403 408first strand
Strand 2
Q
388 396anti-parallel
Strand 3
Q
472 479anti-parallel
Strand 4
Q
464 468anti-parallel
Strand 5
Q
457 461anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
574 579first strand
Strand 2
Q
614 620anti-parallel
Strand 3
Q
630 636anti-parallel
Strand 4
Q
644 650anti-parallel
Strand 5
Q
660 664anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il