Analysis of interatomic Contacts of Structural Units in PDB entry:
4H63


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H63 entry

There are 6 chains in PDB entry 4H63 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
F
 ASP 10PRO 158
H
 ASP 3ARG 200
K
 SER 15MET 112
Q
 MET 99LEU 537
R
 MET 1LEU 207
V
 SER 5GLU 121
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4H63. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
F
18 24Right-handed alpha
Helix 2
2
F
32 38Right-handed alpha
Helix 3
3
F
47 52Right-handed alpha
Helix 4
4
F
68 73Right-handed alpha
Helix 5
5
F
120 144Right-handed alpha
Helix 6
6
H
4 38Right-handed alpha
Helix 7
7
H
42 67Right-handed alpha
Helix 8
8
H
67 73Right-handed alpha
Helix 9
9
H
87 95Right-handed alpha
Helix 10
10
H
100 118Right-handed alpha
Helix 11
11
H
129 148Right-handed alpha
Helix 12
12
H
149 151Right-handed 310
Helix 13
13
H
172 197Right-handed alpha
Helix 14
14
K
16 31Right-handed alpha
Helix 15
15
K
32 47Right-handed alpha
Helix 16
16
K
50 82Right-handed alpha
Helix 17
17
K
97 111Right-handed alpha
Helix 18
18
Q
100 131Right-handed alpha
Helix 19
19
Q
135 141Right-handed 310
Helix 20
20
Q
142 149Right-handed alpha
Helix 21
21
Q
167 214Right-handed alpha
Helix 22
22
Q
292 321Right-handed alpha
Helix 23
23
Q
373 408Right-handed alpha
Helix 24
24
Q
424 448Right-handed alpha
Helix 25
25
Q
458 462Right-handed 310
Helix 26
26
Q
465 473Right-handed alpha
Helix 27
27
Q
522 535Right-handed alpha
Helix 28
28
R
14 24Right-handed alpha
Helix 29
29
R
179 198Right-handed alpha
Helix 30
30
V
6 39Right-handed alpha
Helix 31
31
V
45 84Right-handed alpha
Helix 32
32
V
99 112Right-handed alpha
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There are 8 sheets in PDB entry 4H63. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
16 17first strand
Strand 2
F
114 116anti-parallel
Strand 3
F
102 111anti-parallel
Strand 4
F
88 96anti-parallel
Strand 5
F
75 84anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
148 150first strand
Strand 2
F
154 156anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
74 78first strand
Strand 2
Q
154 158anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
218 220first strand
Strand 2
Q
227 229anti-parallel
Strand 3
Q
242 246anti-parallel
Strand 4
Q
253 256anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
277 282first strand
Strand 2
Q
265 271anti-parallel
Strand 3
Q
342 348anti-parallel
Strand 4
Q
332 336anti-parallel
Strand 5
Q
327 328anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
451 457first strand
Strand 2
Q
479 485anti-parallel
Strand 3
Q
493 497anti-parallel
Strand 4
Q
509 512anti-parallel
Strand 5
Q
517 520anti-parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
157 158first strand
Strand 2
R
136 145anti-parallel
Strand 3
R
118 133anti-parallel
Strand 4
R
27 41anti-parallel
Strand 5
R
56 61anti-parallel
Strand 6
R
78 83anti-parallel
Strand 7
R
95 104anti-parallel
Strand 8
R
2 10anti-parallel
Strand 9
R
202 203anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
157 158first strand
Strand 2
R
136 145anti-parallel
Strand 3
R
165 173anti-parallel
Strand 4
R
2 10anti-parallel
Strand 5
R
202 203anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il