Analysis of interatomic Contacts of Structural Units in PDB entry:
4H69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H69 entry

There are 6 chains in PDB entry 4H69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -4ASN 188
B
 GLY -4ASN 188
C
 GLY -4ASN 188
D
 GLY -4ASN 188
E
 GLY -4ASN 188
F
 GLY -4ASN 188
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 4H69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-4 10Right-handed alpha
Helix 2
2
A
95 97Right-handed 310
Helix 3
3
A
121 124Right-handed 310
Helix 4
4
A
154 158Right-handed 310
Helix 5
5
A
171 176Right-handed alpha
Helix 6
6
A
178 182Right-handed 310
Helix 7
7
B
-3 10Right-handed alpha
Helix 8
8
B
95 97Right-handed 310
Helix 9
9
B
121 124Right-handed 310
Helix 10
10
B
154 158Right-handed 310
Helix 11
11
B
171 176Right-handed alpha
Helix 12
12
B
178 182Right-handed 310
Helix 13
13
C
-3 10Right-handed alpha
Helix 14
14
C
95 97Right-handed 310
Helix 15
15
C
121 124Right-handed 310
Helix 16
16
C
154 158Right-handed 310
Helix 17
17
C
171 176Right-handed alpha
Helix 18
18
C
178 182Right-handed 310
Helix 19
19
D
-3 10Right-handed alpha
Helix 20
20
D
95 97Right-handed 310
Helix 21
21
D
121 124Right-handed 310
Helix 22
22
D
154 158Right-handed 310
Helix 23
23
D
171 176Right-handed alpha
Helix 24
24
D
178 182Right-handed 310
Helix 25
25
E
-3 7Right-handed alpha
Helix 26
26
E
95 97Right-handed 310
Helix 27
27
E
121 124Right-handed 310
Helix 28
28
E
154 158Right-handed 310
Helix 29
29
E
171 176Right-handed alpha
Helix 30
30
E
178 182Right-handed 310
Helix 31
31
F
-3 8Right-handed alpha
Helix 32
32
F
95 97Right-handed 310
Helix 33
33
F
121 124Right-handed 310
Helix 34
34
F
154 158Right-handed 310
Helix 35
35
F
171 176Right-handed alpha
Helix 36
36
F
178 182Right-handed 310
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There are 7 sheets in PDB entry 4H69. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 52first strand
Strand 2
A
64 76anti-parallel
Strand 3
A
85 93anti-parallel
Strand 4
A
99 107anti-parallel
Strand 5
A
112 119anti-parallel
Strand 6
A
127 136anti-parallel
Strand 7
A
140 148anti-parallel
Strand 8
A
11 19anti-parallel
Strand 9
A
55 58anti-parallel
Strand 10
A
64 76anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 52first strand
Strand 2
B
64 78anti-parallel
Strand 3
B
83 93anti-parallel
Strand 4
B
99 107anti-parallel
Strand 5
B
112 119anti-parallel
Strand 6
B
127 136anti-parallel
Strand 7
B
140 148anti-parallel
Strand 8
B
11 19anti-parallel
Strand 9
B
55 58anti-parallel
Strand 10
B
64 78anti-parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
49 52first strand
Strand 2
C
64 78anti-parallel
Strand 3
C
83 93anti-parallel
Strand 4
C
99 107anti-parallel
Strand 5
C
112 119anti-parallel
Strand 6
C
127 136anti-parallel
Strand 7
C
140 148anti-parallel
Strand 8
C
11 19anti-parallel
Strand 9
C
55 58anti-parallel
Strand 10
C
64 78anti-parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
49 52first strand
Strand 2
D
64 78anti-parallel
Strand 3
D
83 93anti-parallel
Strand 4
D
99 107anti-parallel
Strand 5
D
112 119anti-parallel
Strand 6
D
127 136anti-parallel
Strand 7
D
140 148anti-parallel
Strand 8
D
11 19anti-parallel
Strand 9
D
55 58anti-parallel
Strand 10
D
64 78anti-parallel
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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
49 52first strand
Strand 2
E
64 76anti-parallel
Strand 3
E
85 93anti-parallel
Strand 4
E
99 107anti-parallel
Strand 5
E
112 119anti-parallel
Strand 6
E
127 136anti-parallel
Strand 7
E
140 148anti-parallel
Strand 8
E
11 19anti-parallel
Strand 9
E
55 58anti-parallel
Strand 10
E
64 76anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
35 36first strand
Strand 2
E
42 43anti-parallel
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There are 10 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
49 52first strand
Strand 2
F
64 78anti-parallel
Strand 3
F
83 93anti-parallel
Strand 4
F
99 107anti-parallel
Strand 5
F
112 119anti-parallel
Strand 6
F
127 136anti-parallel
Strand 7
F
140 148anti-parallel
Strand 8
F
11 19anti-parallel
Strand 9
F
55 58anti-parallel
Strand 10
F
64 78anti-parallel
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