Analysis of interatomic Contacts of Structural Units in PDB entry:
4H6Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H6Q entry

There are 2 chains in PDB entry 4H6Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 17PRO 297
C
 PRO 17PRO 297
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 4H6Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 19Right-handed 310
Helix 2
2
A
20 32Right-handed alpha
Helix 3
3
A
39 53Right-handed alpha
Helix 4
4
A
68 89Right-handed alpha
Helix 5
5
A
98 102Right-handed 310
Helix 6
6
A
113 128Right-handed alpha
Helix 7
7
A
138 140Right-handed 310
Helix 8
8
A
141 157Right-handed alpha
Helix 9
9
A
171 179Right-handed alpha
Helix 10
10
A
180 183Right-handed 310
Helix 11
11
A
203 221Right-handed alpha
Helix 12
12
A
231 245Right-handed alpha
Helix 13
13
A
261 271Right-handed alpha
Helix 14
14
A
285 295Right-handed alpha
Helix 15
15
C
18 32Right-handed alpha
Helix 16
16
C
39 53Right-handed alpha
Helix 17
17
C
68 89Right-handed alpha
Helix 18
18
C
98 102Right-handed 310
Helix 19
19
C
113 128Right-handed alpha
Helix 20
20
C
138 140Right-handed 310
Helix 21
21
C
141 157Right-handed alpha
Helix 22
22
C
171 178Right-handed alpha
Helix 23
23
C
179 183Right-handed 310
Helix 24
24
C
203 221Right-handed alpha
Helix 25
25
C
231 245Right-handed alpha
Helix 26
26
C
261 271Right-handed alpha
Helix 27
27
C
285 295Right-handed alpha
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There are 4 sheets in PDB entry 4H6Q. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 61first strand
Strand 2
A
94 97parallel
Strand 3
A
131 134parallel
Strand 4
A
161 166parallel
Strand 5
A
186 189parallel
Strand 6
A
225 228parallel
Strand 7
A
252 257parallel
Strand 8
A
275 281parallel
Strand 9
A
56 61parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 108first strand
Strand 2
A
111 112anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 61first strand
Strand 2
C
94 97parallel
Strand 3
C
131 134parallel
Strand 4
C
161 166parallel
Strand 5
C
186 189parallel
Strand 6
C
225 228parallel
Strand 7
C
252 257parallel
Strand 8
C
274 281parallel
Strand 9
C
56 61parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
107 108first strand
Strand 2
C
111 112anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il