Analysis of interatomic Contacts of Structural Units in PDB entry:
4H6W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H6W entry

There are 2 chains in PDB entry 4H6W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 4THR 290
B
 ILE 4GLY 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4H6W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 14Right-handed alpha
Helix 2
2
A
33 37Right-handed 310
Helix 3
3
A
59 71Right-handed alpha
Helix 4
4
A
100 114Right-handed alpha
Helix 5
5
A
133 146Right-handed alpha
Helix 6
6
A
190 196Right-handed alpha
Helix 7
7
A
219 241Right-handed alpha
Helix 8
8
A
246 257Right-handed alpha
Helix 9
9
A
268 273Right-handed 310
Helix 10
10
A
278 287Right-handed alpha
Helix 11
11
B
6 14Right-handed alpha
Helix 12
12
B
33 37Right-handed 310
Helix 13
13
B
59 71Right-handed alpha
Helix 14
14
B
100 114Right-handed alpha
Helix 15
15
B
133 146Right-handed alpha
Helix 16
16
B
190 195Right-handed alpha
Helix 17
17
B
219 241Right-handed alpha
Helix 18
18
B
246 257Right-handed alpha
Helix 19
19
B
268 273Right-handed 310
Helix 20
20
B
278 287Right-handed alpha
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There are 6 sheets in PDB entry 4H6W. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 43first strand
Strand 2
A
85 88parallel
Strand 3
A
21 25parallel
Strand 4
A
118 121parallel
Strand 5
A
149 153parallel
Strand 6
A
172 177parallel
Strand 7
A
197 201parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 127first strand
Strand 2
A
162 164anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 208first strand
Strand 2
A
214 217anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 43first strand
Strand 2
B
85 90parallel
Strand 3
B
21 26parallel
Strand 4
B
118 121parallel
Strand 5
B
149 153parallel
Strand 6
B
172 177parallel
Strand 7
B
197 201parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 127first strand
Strand 2
B
162 164anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
205 208first strand
Strand 2
B
214 217anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il