Analysis of interatomic Contacts of Structural Units in PDB entry:
4H7P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H7P entry

There are 2 chains in PDB entry 4H7P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 324
B
 SER 2LEU 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 4H7P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 26Right-handed alpha
Helix 2
2
A
42 44Right-handed 310
Helix 3
3
A
45 59Right-handed alpha
Helix 4
4
A
72 77Right-handed alpha
Helix 5
5
A
96 119Right-handed alpha
Helix 6
6
A
131 143Right-handed alpha
Helix 7
7
A
148 150Right-handed 310
Helix 8
8
A
156 172Right-handed alpha
Helix 9
9
A
174 176Right-handed 310
Helix 10
10
A
206 209Right-handed 310
Helix 11
11
A
218 234Right-handed alpha
Helix 12
12
A
238 255Right-handed alpha
Helix 13
13
A
305 307Right-handed 310
Helix 14
14
A
308 322Right-handed alpha
Helix 15
15
B
13 25Right-handed alpha
Helix 16
16
B
42 44Right-handed 310
Helix 17
17
B
45 59Right-handed alpha
Helix 18
18
B
72 78Right-handed alpha
Helix 19
19
B
96 119Right-handed alpha
Helix 20
20
B
131 143Right-handed alpha
Helix 21
21
B
148 150Right-handed 310
Helix 22
22
B
156 172Right-handed alpha
Helix 23
23
B
174 176Right-handed 310
Helix 24
24
B
218 234Right-handed alpha
Helix 25
25
B
238 255Right-handed alpha
Helix 26
26
B
305 307Right-handed 310
Helix 27
27
B
308 322Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 4H7P. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 70first strand
Strand 2
A
35 40parallel
Strand 3
A
4 9parallel
Strand 4
A
82 85parallel
Strand 5
A
124 127parallel
Strand 6
A
152 154parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 179first strand
Strand 2
A
199 200anti-parallel
Strand 3
A
203 204anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 184first strand
Strand 2
A
192 194anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 267first strand
Strand 2
A
280 288anti-parallel
Strand 3
A
291 294anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 70first strand
Strand 2
B
35 40parallel
Strand 3
B
4 9parallel
Strand 4
B
82 85parallel
Strand 5
B
124 127parallel
Strand 6
B
152 154parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 179first strand
Strand 2
B
199 200anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
182 184first strand
Strand 2
B
192 194anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 267first strand
Strand 2
B
280 288anti-parallel
Strand 3
B
291 294anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il