Analysis of interatomic Contacts of Structural Units in PDB entry:
4H8E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H8E entry

There is 1 chain in PDB entry 4H8E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 19LEU 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4H8E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 42Right-handed alpha
Helix 2
2
A
45 68Right-handed alpha
Helix 3
3
A
80 84Right-handed 310
Helix 4
4
A
85 110Right-handed alpha
Helix 5
5
A
119 123Right-handed 310
Helix 6
6
A
124 138Right-handed alpha
Helix 7
7
A
153 172Right-handed alpha
Helix 8
8
A
175 179Right-handed 310
Helix 9
9
A
180 186Right-handed alpha
Helix 10
10
A
227 231Right-handed 310
Helix 11
11
A
232 246Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4H8E.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 117first strand
Strand 2
A
145 152parallel
Strand 3
A
71 78parallel
Strand 4
A
27 31parallel
Strand 5
A
198 201parallel
Strand 6
A
220 223parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il