Analysis of interatomic Contacts of Structural Units in PDB entry:
4H8N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H8N entry

There are 2 chains in PDB entry 4H8N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 5LEU 307
B
 LEU 6LEU 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 4H8N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 30Right-handed 310
Helix 2
2
A
39 53Right-handed alpha
Helix 3
3
A
60 64Right-handed 310
Helix 4
4
A
65 76Right-handed alpha
Helix 5
5
A
79 83Right-handed 310
Helix 6
6
A
102 115Right-handed alpha
Helix 7
7
A
138 152Right-handed alpha
Helix 8
8
A
164 175Right-handed alpha
Helix 9
9
A
177 181Right-handed 310
Helix 10
10
A
190 194Right-handed 310
Helix 11
11
A
199 207Right-handed alpha
Helix 12
12
A
217 222Right-handed alpha
Helix 13
13
A
228 240Right-handed alpha
Helix 14
14
A
242 254Right-handed alpha
Helix 15
15
A
264 273Right-handed alpha
Helix 16
16
A
280 293Right-handed alpha
Helix 17
17
A
300 305Right-handed alpha
Helix 18
18
B
26 30Right-handed 310
Helix 19
19
B
39 53Right-handed alpha
Helix 20
20
B
60 64Right-handed 310
Helix 21
21
B
65 76Right-handed alpha
Helix 22
22
B
79 83Right-handed 310
Helix 23
23
B
102 115Right-handed alpha
Helix 24
24
B
130 135Right-handed alpha
Helix 25
25
B
138 152Right-handed alpha
Helix 26
26
B
164 175Right-handed alpha
Helix 27
27
B
177 181Right-handed 310
Helix 28
28
B
190 194Right-handed 310
Helix 29
29
B
199 207Right-handed alpha
Helix 30
30
B
217 222Right-handed alpha
Helix 31
31
B
228 240Right-handed alpha
Helix 32
32
B
242 254Right-handed alpha
Helix 33
33
B
264 273Right-handed alpha
Helix 34
34
B
280 294Right-handed alpha
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There are 4 sheets in PDB entry 4H8N. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
56 58parallel
Strand 3
A
84 89parallel
Strand 4
A
119 124parallel
Strand 5
A
155 161parallel
Strand 6
A
184 188parallel
Strand 7
A
210 214parallel
Strand 8
A
257 260parallel
Strand 9
A
22 24parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
A
96 97anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 24first strand
Strand 2
B
56 58parallel
Strand 3
B
84 89parallel
Strand 4
B
119 124parallel
Strand 5
B
155 161parallel
Strand 6
B
184 188parallel
Strand 7
B
210 214parallel
Strand 8
B
257 260parallel
Strand 9
B
22 24parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 93first strand
Strand 2
B
96 97anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il