Analysis of interatomic Contacts of Structural Units in PDB entry:
4HBP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HBP entry

There are 2 chains in PDB entry 4HBP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 37THR 573
B
 ALA 37GLN 577
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 4HBP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
41 66Right-handed alpha
Helix 2
2
A
70 76Right-handed alpha
Helix 3
3
A
78 89Right-handed alpha
Helix 4
4
A
92 112Right-handed alpha
Helix 5
5
A
156 160Right-handed 310
Helix 6
6
A
168 177Right-handed alpha
Helix 7
7
A
218 227Right-handed alpha
Helix 8
8
A
242 250Right-handed alpha
Helix 9
9
A
286 298Right-handed alpha
Helix 10
10
A
299 305Right-handed alpha
Helix 11
11
A
315 320Right-handed alpha
Helix 12
12
A
339 357Right-handed alpha
Helix 13
13
A
367 374Right-handed alpha
Helix 14
14
A
374 381Right-handed alpha
Helix 15
15
A
387 393Right-handed 310
Helix 16
16
A
398 402Right-handed 310
Helix 17
17
A
403 409Right-handed alpha
Helix 18
18
A
411 423Right-handed alpha
Helix 19
19
A
426 436Right-handed alpha
Helix 20
20
A
440 465Right-handed alpha
Helix 21
21
A
483 490Right-handed 310
Helix 22
22
A
491 500Right-handed alpha
Helix 23
23
A
513 519Right-handed alpha
Helix 24
24
A
520 523Right-handed 310
Helix 25
25
A
529 539Right-handed alpha
Helix 26
26
A
557 573Right-handed alpha
Helix 27
27
B
41 66Right-handed alpha
Helix 28
28
B
70 76Right-handed alpha
Helix 29
29
B
78 88Right-handed alpha
Helix 30
30
B
92 112Right-handed alpha
Helix 31
31
B
156 160Right-handed 310
Helix 32
32
B
168 177Right-handed alpha
Helix 33
33
B
218 227Right-handed alpha
Helix 34
34
B
242 250Right-handed alpha
Helix 35
35
B
286 298Right-handed alpha
Helix 36
36
B
299 305Right-handed alpha
Helix 37
37
B
315 320Right-handed alpha
Helix 38
38
B
339 357Right-handed alpha
Helix 39
39
B
367 374Right-handed alpha
Helix 40
40
B
374 381Right-handed alpha
Helix 41
41
B
387 393Right-handed 310
Helix 42
42
B
398 402Right-handed 310
Helix 43
43
B
403 409Right-handed alpha
Helix 44
44
B
411 423Right-handed alpha
Helix 45
45
B
426 436Right-handed alpha
Helix 46
46
B
440 465Right-handed alpha
Helix 47
47
B
483 490Right-handed 310
Helix 48
48
B
491 500Right-handed alpha
Helix 49
49
B
513 519Right-handed alpha
Helix 50
50
B
520 523Right-handed 310
Helix 51
51
B
529 539Right-handed alpha
Helix 52
52
B
557 573Right-handed alpha
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There are 4 sheets in PDB entry 4HBP. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 11 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 117first strand
Strand 2
A
180 185anti-parallel
Strand 3
A
138 142parallel
Strand 4
A
232 237parallel
Strand 5
A
279 284anti-parallel
Strand 6
A
252 255anti-parallel
Strand 7
A
504 511anti-parallel
Strand 8
A
546 553anti-parallel
Strand 9
A
469 473anti-parallel
Strand 10
A
326 329parallel
Strand 11
A
359 362parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 198first strand
Strand 2
A
202 203anti-parallel
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There are 11 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 117first strand
Strand 2
B
180 185anti-parallel
Strand 3
B
138 142parallel
Strand 4
B
232 237parallel
Strand 5
B
279 284anti-parallel
Strand 6
B
252 255anti-parallel
Strand 7
B
504 511anti-parallel
Strand 8
B
546 552anti-parallel
Strand 9
B
469 473anti-parallel
Strand 10
B
326 329parallel
Strand 11
B
359 362parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
197 198first strand
Strand 2
B
202 203anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il