Analysis of interatomic Contacts of Structural Units in PDB entry:
4HE8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HE8 entry

There are 5 chains in PDB entry 4HE8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1MET 116
J
 MET 1GLY 160
K
 MET 1GLY 95
L
 MET 1ARG 605
M
 MET 1SER 372
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are202 helices in PDB entry 4HE8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 29Right-handed alpha
Helix 2
2
A
56 84Right-handed alpha
Helix 3
3
A
88 114Right-handed alpha
Helix 4
4
J
2 22Right-handed alpha
Helix 5
5
J
24 46Right-handed alpha
Helix 6
6
J
48 58Right-handed alpha
Helix 7
7
J
62 74Right-handed alpha
Helix 8
8
J
89 109Right-handed alpha
Helix 9
9
J
123 132Right-handed alpha
Helix 10
10
J
135 156Right-handed alpha
Helix 11
11
K
2 21Right-handed alpha
Helix 12
12
K
23 50Right-handed alpha
Helix 13
13
K
51 79Right-handed alpha
Helix 14
14
K
86 90Right-handed 310
Helix 15
15
L
2 13Right-handed alpha
Helix 16
16
L
13 20Right-handed alpha
Helix 17
17
L
27 50Right-handed alpha
Helix 18
18
L
70 95Right-handed alpha
Helix 19
19
L
100 120Right-handed alpha
Helix 20
20
L
123 143Right-handed alpha
Helix 21
21
L
149 179Right-handed alpha
Helix 22
22
L
184 191Right-handed alpha
Helix 23
23
L
198 217Right-handed alpha
Helix 24
24
L
221 232Right-handed 310
Helix 25
25
L
233 242Right-handed alpha
Helix 26
26
L
245 256Right-handed alpha
Helix 27
27
L
256 261Right-handed alpha
Helix 28
28
L
263 284Right-handed alpha
Helix 29
29
L
290 312Right-handed alpha
Helix 30
30
L
314 343Right-handed alpha
Helix 31
31
L
361 375Right-handed alpha
Helix 32
32
L
379 395Right-handed alpha
Helix 33
33
L
399 426Right-handed alpha
Helix 34
34
L
439 456Right-handed alpha
Helix 35
35
L
457 460Right-handed 310
Helix 36
36
L
469 477Right-handed alpha
Helix 37
37
L
488 512Right-handed alpha
Helix 38
38
L
518 520Right-handed 310
Helix 39
39
L
521 526Right-handed alpha
Helix 40
40
L
530 533Right-handed 310
Helix 41
41
L
534 539Right-handed alpha
Helix 42
42
L
542 579Right-handed alpha
Helix 43
43
L
585 605Right-handed alpha
Helix 44
44
M
2 18Right-handed alpha
Helix 45
45
M
22 41Right-handed alpha
Helix 46
46
M
68 89Right-handed alpha
Helix 47
47
M
95 112Right-handed alpha
Helix 48
48
M
114 125Right-handed alpha
Helix 49
49
M
125 135Right-handed alpha
Helix 50
50
M
140 169Right-handed alpha
Helix 51
51
M
176 183Right-handed alpha
Helix 52
52
M
189 204Right-handed alpha
Helix 53
53
M
207 211Right-handed 310
Helix 54
54
M
213 221Right-handed alpha
Helix 55
55
M
225 234Right-handed alpha
Helix 56
56
M
236 244Right-handed alpha
Helix 57
57
M
244 249Right-handed alpha
Helix 58
58
M
249 275Right-handed alpha
Helix 59
59
M
276 278Right-handed 310
Helix 60
60
M
280 302Right-handed alpha
Helix 61
61
M
304 337Right-handed alpha
Helix 62
62
M
353 366Right-handed alpha
Helix 63
63
M
372 388Right-handed alpha
Helix 64
64
M
388 397Right-handed alpha
Helix 65
65
M
398 414Right-handed alpha
Helix 66
66
M
426 446Right-handed alpha
Helix 67
67
M
453 464Right-handed alpha
Helix 68
68
N
2 17Right-handed alpha
Helix 69
69
N
21 43Right-handed alpha
Helix 70
70
N
56 76Right-handed alpha
Helix 71
71
N
82 100Right-handed alpha
Helix 72
72
N
103 122Right-handed alpha
Helix 73
73
N
126 158Right-handed alpha
Helix 74
74
N
169 187Right-handed alpha
Helix 75
75
N
194 203Right-handed alpha
Helix 76
76
N
204 226Right-handed alpha
Helix 77
77
N
229 250Right-handed alpha
Helix 78
78
N
253 270Right-handed alpha
Helix 79
79
N
271 274Right-handed 310
Helix 80
80
N
278 303Right-handed alpha
Helix 81
81
N
308 313Right-handed 310
Helix 82
82
N
314 319Right-handed alpha
Helix 83
83
N
319 335Right-handed alpha
Helix 84
84
N
339 356Right-handed alpha
Helix 85
85
N
357 371Right-handed alpha
Helix 86
86
N
371 380Right-handed alpha
Helix 87
87
N
381 384Right-handed 310
Helix 88
88
N
395 415Right-handed alpha
Helix 89
89
N
419 423Right-handed 310
Helix 90
90
H
9 39Right-handed alpha
Helix 91
91
H
80 95Right-handed alpha
Helix 92
92
H
120 144Right-handed alpha
Helix 93
93
H
147 178Right-handed alpha
Helix 94
94
H
181 192Right-handed alpha
Helix 95
95
H
194 198Right-handed 310
Helix 96
96
H
199 213Right-handed alpha
Helix 97
97
H
237 263Right-handed alpha
Helix 98
98
H
274 296Right-handed alpha
Helix 99
99
H
302 310Right-handed alpha
Helix 100
100
H
312 330Right-handed alpha
Helix 101
101
H
334 351Right-handed alpha
Helix 102
102
B
4 29Right-handed alpha
Helix 103
103
B
56 84Right-handed alpha
Helix 104
104
B
88 114Right-handed alpha
Helix 105
105
D
2 22Right-handed alpha
Helix 106
106
D
24 46Right-handed alpha
Helix 107
107
D
48 58Right-handed alpha
Helix 108
108
D
62 74Right-handed alpha
Helix 109
109
D
89 109Right-handed alpha
Helix 110
110
D
123 132Right-handed alpha
Helix 111
111
D
135 156Right-handed alpha
Helix 112
112
E
2 21Right-handed alpha
Helix 113
113
E
23 50Right-handed alpha
Helix 114
114
E
51 79Right-handed alpha
Helix 115
115
E
86 90Right-handed 310
Helix 116
116
F
2 13Right-handed alpha
Helix 117
117
F
13 20Right-handed alpha
Helix 118
118
F
27 50Right-handed alpha
Helix 119
119
F
70 95Right-handed alpha
Helix 120
120
F
100 120Right-handed alpha
Helix 121
121
F
123 143Right-handed alpha
Helix 122
122
F
149 179Right-handed alpha
Helix 123
123
F
184 191Right-handed alpha
Helix 124
124
F
198 217Right-handed alpha
Helix 125
125
F
221 232Right-handed 310
Helix 126
126
F
233 242Right-handed alpha
Helix 127
127
F
245 256Right-handed alpha
Helix 128
128
F
256 261Right-handed alpha
Helix 129
129
F
263 284Right-handed alpha
Helix 130
130
F
290 312Right-handed alpha
Helix 131
131
F
314 343Right-handed alpha
Helix 132
132
F
361 375Right-handed alpha
Helix 133
133
F
379 395Right-handed alpha
Helix 134
134
F
399 426Right-handed alpha
Helix 135
135
F
439 456Right-handed alpha
Helix 136
136
F
457 460Right-handed 310
Helix 137
137
F
469 477Right-handed alpha
Helix 138
138
F
488 512Right-handed alpha
Helix 139
139
F
518 520Right-handed 310
Helix 140
140
F
521 526Right-handed alpha
Helix 141
141
F
530 533Right-handed 310
Helix 142
142
F
534 539Right-handed alpha
Helix 143
143
F
542 579Right-handed alpha
Helix 144
144
F
585 605Right-handed alpha
Helix 145
145
G
2 18Right-handed alpha
Helix 146
146
G
22 41Right-handed alpha
Helix 147
147
G
68 89Right-handed alpha
Helix 148
148
G
95 112Right-handed alpha
Helix 149
149
G
114 125Right-handed alpha
Helix 150
150
G
125 135Right-handed alpha
Helix 151
151
G
140 169Right-handed alpha
Helix 152
152
G
176 183Right-handed alpha
Helix 153
153
G
189 204Right-handed alpha
Helix 154
154
G
207 211Right-handed 310
Helix 155
155
G
213 221Right-handed alpha
Helix 156
156
G
225 234Right-handed alpha
Helix 157
157
G
236 244Right-handed alpha
Helix 158
158
G
244 249Right-handed alpha
Helix 159
159
G
249 275Right-handed alpha
Helix 160
160
G
276 278Right-handed 310
Helix 161
161
G
280 302Right-handed alpha
Helix 162
162
G
304 337Right-handed alpha
Helix 163
163
G
353 367Right-handed alpha
Helix 164
164
G
372 388Right-handed alpha
Helix 165
165
G
388 397Right-handed alpha
Helix 166
166
G
398 414Right-handed alpha
Helix 167
167
G
426 446Right-handed alpha
Helix 168
168
G
453 464Right-handed alpha
Helix 169
169
I
2 17Right-handed alpha
Helix 170
170
I
21 43Right-handed alpha
Helix 171
171
I
56 76Right-handed alpha
Helix 172
172
I
82 100Right-handed alpha
Helix 173
173
I
103 122Right-handed alpha
Helix 174
174
I
126 158Right-handed alpha
Helix 175
175
I
169 187Right-handed alpha
Helix 176
176
I
194 203Right-handed alpha
Helix 177
177
I
204 226Right-handed alpha
Helix 178
178
I
229 250Right-handed alpha
Helix 179
179
I
253 270Right-handed alpha
Helix 180
180
I
271 274Right-handed 310
Helix 181
181
I
278 303Right-handed alpha
Helix 182
182
I
308 313Right-handed 310
Helix 183
183
I
314 319Right-handed alpha
Helix 184
184
I
319 335Right-handed alpha
Helix 185
185
I
339 356Right-handed alpha
Helix 186
186
I
357 371Right-handed alpha
Helix 187
187
I
371 380Right-handed alpha
Helix 188
188
I
381 384Right-handed 310
Helix 189
189
I
395 415Right-handed alpha
Helix 190
190
I
419 423Right-handed 310
Helix 191
191
C
9 39Right-handed alpha
Helix 192
192
C
80 95Right-handed alpha
Helix 193
193
C
120 144Right-handed alpha
Helix 194
194
C
147 178Right-handed alpha
Helix 195
195
C
181 192Right-handed alpha
Helix 196
196
C
194 198Right-handed 310
Helix 197
197
C
199 213Right-handed alpha
Helix 198
198
C
237 263Right-handed alpha
Helix 199
199
C
274 296Right-handed alpha
Helix 200
200
C
302 310Right-handed alpha
Helix 201
201
C
312 330Right-handed alpha
Helix 202
202
C
334 351Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 4HE8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
53 57first strand
Strand 2
L
65 69anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
51 54first strand
Strand 2
M
62 65anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
48 49first strand
Strand 2
N
54 55anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
53 57first strand
Strand 2
F
65 69anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
51 54first strand
Strand 2
G
62 65anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
48 49first strand
Strand 2
I
54 55anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il