Analysis of interatomic Contacts of Structural Units in PDB entry:
4HGR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4HGR entry

There are 8 chains in PDB entry 4HGR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ILE 163
B	LYS 2	GLN 164
C	MET 1	VAL 162
D	LYS 2	GLN 164
E	MET 1	GLN 164
F	LYS 2	ILE 163
G	MET 1	ILE 163
H	LYS 2	ILE 163

There are 72 helices in PDB entry 4HGR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	36	46	Right-handed alpha
Helix 2	2	A	58	68	Right-handed alpha
Helix 3	3	A	79	92	Right-handed alpha
Helix 4	4	A	94	96	Right-handed 310
Helix 5	5	A	104	106	Right-handed 310
Helix 6	6	A	107	112	Right-handed alpha
Helix 7	7	A	124	129	Right-handed alpha
Helix 8	8	A	142	152	Right-handed alpha
Helix 9	9	A	155	163	Right-handed alpha
Helix 10	10	B	36	46	Right-handed alpha
Helix 11	11	B	58	68	Right-handed alpha
Helix 12	12	B	79	92	Right-handed alpha
Helix 13	13	B	94	96	Right-handed 310
Helix 14	14	B	104	106	Right-handed 310
Helix 15	15	B	107	112	Right-handed alpha
Helix 16	16	B	124	129	Right-handed alpha
Helix 17	17	B	142	152	Right-handed alpha
Helix 18	18	B	155	163	Right-handed alpha
Helix 19	19	C	36	46	Right-handed alpha
Helix 20	20	C	58	68	Right-handed alpha
Helix 21	21	C	79	92	Right-handed alpha
Helix 22	22	C	94	96	Right-handed 310
Helix 23	23	C	104	106	Right-handed 310
Helix 24	24	C	107	112	Right-handed alpha
Helix 25	25	C	124	129	Right-handed alpha
Helix 26	26	C	142	153	Right-handed alpha
Helix 27	27	C	155	162	Right-handed alpha
Helix 28	28	D	36	46	Right-handed alpha
Helix 29	29	D	58	68	Right-handed alpha
Helix 30	30	D	79	92	Right-handed alpha
Helix 31	31	D	94	96	Right-handed 310
Helix 32	32	D	104	106	Right-handed 310
Helix 33	33	D	107	112	Right-handed alpha
Helix 34	34	D	124	129	Right-handed alpha
Helix 35	35	D	142	152	Right-handed alpha
Helix 36	36	D	155	163	Right-handed alpha
Helix 37	37	E	36	46	Right-handed alpha
Helix 38	38	E	58	68	Right-handed alpha
Helix 39	39	E	79	90	Right-handed alpha
Helix 40	40	E	94	96	Right-handed 310
Helix 41	41	E	104	106	Right-handed 310
Helix 42	42	E	107	112	Right-handed alpha
Helix 43	43	E	124	129	Right-handed alpha
Helix 44	44	E	142	152	Right-handed alpha
Helix 45	45	E	155	163	Right-handed alpha
Helix 46	46	F	35	46	Right-handed alpha
Helix 47	47	F	58	68	Right-handed alpha
Helix 48	48	F	79	92	Right-handed alpha
Helix 49	49	F	94	96	Right-handed 310
Helix 50	50	F	104	106	Right-handed 310
Helix 51	51	F	107	114	Right-handed alpha
Helix 52	52	F	124	129	Right-handed alpha
Helix 53	53	F	142	152	Right-handed alpha
Helix 54	54	F	155	163	Right-handed alpha
Helix 55	55	G	36	46	Right-handed alpha
Helix 56	56	G	58	68	Right-handed alpha
Helix 57	57	G	79	92	Right-handed alpha
Helix 58	58	G	94	96	Right-handed 310
Helix 59	59	G	104	106	Right-handed 310
Helix 60	60	G	107	112	Right-handed alpha
Helix 61	61	G	124	129	Right-handed alpha
Helix 62	62	G	142	152	Right-handed alpha
Helix 63	63	G	155	163	Right-handed alpha
Helix 64	64	H	36	46	Right-handed alpha
Helix 65	65	H	58	68	Right-handed alpha
Helix 66	66	H	79	92	Right-handed alpha
Helix 67	67	H	94	96	Right-handed 310
Helix 68	68	H	104	106	Right-handed 310
Helix 69	69	H	107	112	Right-handed alpha
Helix 70	70	H	124	129	Right-handed alpha
Helix 71	71	H	142	153	Right-handed alpha
Helix 72	72	H	155	163	Right-handed alpha

There are 10 sheets in PDB entry 4HGR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	72	75	first strand
Strand 2	A	50	54	parallel
Strand 3	A	6	9	parallel
Strand 4	A	98	101	parallel
Strand 5	A	116	118	parallel

Back to list of sheets
Back to top of page

There are 9 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	23	first strand
Strand 2	A	28	33	anti-parallel
Strand 3	C	19	23	anti-parallel
Strand 4	C	28	33	anti-parallel
Strand 5	D	19	22	anti-parallel
Strand 6	D	28	33	anti-parallel
Strand 7	B	19	22	anti-parallel
Strand 8	B	28	33	anti-parallel
Strand 9	A	19	23	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	72	74	first strand
Strand 2	B	50	53	parallel
Strand 3	B	6	9	parallel
Strand 4	B	98	101	parallel
Strand 5	B	116	118	parallel

Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	72	74	first strand
Strand 2	C	50	53	parallel
Strand 3	C	6	9	parallel
Strand 4	C	98	101	parallel
Strand 5	C	116	118	parallel

Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	72	74	first strand
Strand 2	D	50	53	parallel
Strand 3	D	6	9	parallel
Strand 4	D	98	101	parallel
Strand 5	D	116	118	parallel

Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	72	74	first strand
Strand 2	E	50	53	parallel
Strand 3	E	6	9	parallel
Strand 4	E	98	101	parallel
Strand 5	E	116	118	parallel

Back to list of sheets
Back to top of page

There are 9 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	22	first strand
Strand 2	E	28	33	anti-parallel
Strand 3	G	19	23	anti-parallel
Strand 4	G	28	33	anti-parallel
Strand 5	H	19	22	anti-parallel
Strand 6	H	28	33	anti-parallel
Strand 7	F	19	22	anti-parallel
Strand 8	F	28	33	anti-parallel
Strand 9	E	19	22	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	72	74	first strand
Strand 2	F	50	53	parallel
Strand 3	F	6	9	parallel
Strand 4	F	98	101	parallel
Strand 5	F	116	118	parallel

Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	72	74	first strand
Strand 2	G	50	53	parallel
Strand 3	G	6	9	parallel
Strand 4	G	98	101	parallel
Strand 5	G	116	118	parallel

Back to list of sheets
Back to top of page

There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	72	74	first strand
Strand 2	H	50	53	parallel
Strand 3	H	6	9	parallel
Strand 4	H	98	101	parallel
Strand 5	H	116	118	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4HGR

Analysis of interatomic Contacts of Structural Units in PDB entry:
4HGR