Analysis of interatomic Contacts of Structural Units in PDB entry:
4HGX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HGX entry

There are 2 chains in PDB entry 4HGX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 2LEU 269
B
 MET 2GLN 272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 4HGX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 16Right-handed 310
Helix 2
2
A
20 31Right-handed alpha
Helix 3
3
A
52 63Right-handed alpha
Helix 4
4
A
80 98Right-handed alpha
Helix 5
5
A
114 131Right-handed alpha
Helix 6
6
A
150 162Right-handed alpha
Helix 7
7
A
171 176Right-handed alpha
Helix 8
8
A
189 191Right-handed 310
Helix 9
9
A
206 210Right-handed 310
Helix 10
10
A
211 215Right-handed 310
Helix 11
11
A
225 237Right-handed alpha
Helix 12
12
A
248 253Right-handed 310
Helix 13
13
A
255 266Right-handed alpha
Helix 14
14
B
5 7Right-handed 310
Helix 15
15
B
14 16Right-handed 310
Helix 16
16
B
20 31Right-handed alpha
Helix 17
17
B
52 63Right-handed alpha
Helix 18
18
B
80 98Right-handed alpha
Helix 19
19
B
114 132Right-handed alpha
Helix 20
20
B
150 161Right-handed alpha
Helix 21
21
B
171 177Right-handed alpha
Helix 22
22
B
183 188Right-handed alpha
Helix 23
23
B
189 191Right-handed 310
Helix 24
24
B
206 210Right-handed 310
Helix 25
25
B
211 215Right-handed 310
Helix 26
26
B
225 236Right-handed alpha
Helix 27
27
B
248 254Right-handed 310
Helix 28
28
B
255 272Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4HGX. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 12first strand
Strand 2
A
35 39parallel
Strand 3
A
66 73parallel
Strand 4
A
101 104parallel
Strand 5
A
135 138parallel
Strand 6
A
166 170parallel
Strand 7
A
193 198parallel
Strand 8
A
242 244parallel
Strand 9
A
9 12parallel
Back to list of sheets
Back to top of page

There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 12first strand
Strand 2
B
35 39parallel
Strand 3
B
66 73parallel
Strand 4
B
101 104parallel
Strand 5
B
135 138parallel
Strand 6
B
166 170parallel
Strand 7
B
193 198parallel
Strand 8
B
242 244parallel
Strand 9
B
9 12parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il