Analysis of interatomic Contacts of Structural Units in PDB entry:
4HH0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HH0 entry

There are 2 chains in PDB entry 4HH0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 14ALA 398
B
 ASP 15ALA 398
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 4HH0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 49Right-handed alpha
Helix 2
2
A
68 81Right-handed alpha
Helix 3
3
A
112 119Right-handed alpha
Helix 4
4
A
141 163Right-handed alpha
Helix 5
5
A
171 202Right-handed alpha
Helix 6
6
A
206 218Right-handed alpha
Helix 7
7
A
220 241Right-handed alpha
Helix 8
8
A
245 264Right-handed alpha
Helix 9
9
A
286 300Right-handed alpha
Helix 10
10
A
311 323Right-handed alpha
Helix 11
11
A
338 354Right-handed alpha
Helix 12
12
A
365 370Right-handed 310
Helix 13
13
A
371 379Right-handed alpha
Helix 14
14
A
386 388Right-handed 310
Helix 15
15
A
389 398Right-handed alpha
Helix 16
16
B
30 49Right-handed alpha
Helix 17
17
B
68 82Right-handed alpha
Helix 18
18
B
112 117Right-handed alpha
Helix 19
19
B
141 163Right-handed alpha
Helix 20
20
B
171 202Right-handed alpha
Helix 21
21
B
206 218Right-handed alpha
Helix 22
22
B
220 241Right-handed alpha
Helix 23
23
B
245 264Right-handed alpha
Helix 24
24
B
286 300Right-handed alpha
Helix 25
25
B
311 323Right-handed alpha
Helix 26
26
B
338 354Right-handed alpha
Helix 27
27
B
365 370Right-handed 310
Helix 28
28
B
371 378Right-handed alpha
Helix 29
29
B
386 388Right-handed 310
Helix 30
30
B
389 398Right-handed alpha
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There are 4 sheets in PDB entry 4HH0. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 96first strand
Strand 2
A
16 25anti-parallel
Strand 3
A
60 67anti-parallel
Strand 4
A
51 57anti-parallel
Strand 5
A
107 111parallel
Strand 6
A
127 129parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 307first strand
Strand 2
A
274 279parallel
Strand 3
A
326 329parallel
Strand 4
A
360 363parallel
Strand 5
A
382 383parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 95first strand
Strand 2
B
17 25anti-parallel
Strand 3
B
60 67anti-parallel
Strand 4
B
51 57anti-parallel
Strand 5
B
107 111parallel
Strand 6
B
127 129parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
303 307first strand
Strand 2
B
275 279parallel
Strand 3
B
326 329parallel
Strand 4
B
360 363parallel
Strand 5
B
382 383parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il