Analysis of interatomic Contacts of Structural Units in PDB entry:
4HHE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HHE entry

There is 1 chain in PDB entry 4HHE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4HHE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 19Right-handed alpha
Helix 2
2
A
29 36Right-handed alpha
Helix 3
3
A
41 49Right-handed alpha
Helix 4
4
A
62 73Right-handed alpha
Helix 5
5
A
94 105Right-handed alpha
Helix 6
6
A
117 122Right-handed alpha
Helix 7
7
A
132 140Right-handed alpha
Helix 8
8
A
150 162Right-handed alpha
Helix 9
9
A
176 180Right-handed 310
Helix 10
10
A
181 191Right-handed alpha
Helix 11
11
A
204 210Right-handed alpha
Helix 12
12
A
216 221Right-handed alpha
Helix 13
13
A
236 246Right-handed alpha
Helix 14
14
A
267 278Right-handed alpha
Helix 15
15
A
285 303Right-handed alpha
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There are 3 sheets in PDB entry 4HHE. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
20 25parallel
Strand 3
A
56 60parallel
Strand 4
A
77 79parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 128first strand
Strand 2
A
110 113parallel
Strand 3
A
144 148parallel
Strand 4
A
164 167parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 214first strand
Strand 2
A
197 199parallel
Strand 3
A
231 233parallel
Strand 4
A
252 253parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il