Analysis of interatomic Contacts of Structural Units in PDB entry:
4HHH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HHH entry

There are 8 chains in PDB entry 4HHH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 12PHE 469
B
 GLY 12PHE 469
C
 GLY 12PHE 469
D
 GLY 12PHE 469
S
 MET 1TYR 123
T
 MET 1TYR 123
U
 MET 1TYR 123
V
 MET 1TYR 123
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 97 helices in PDB entry 4HHH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 25Right-handed alpha
Helix 2
2
A
49 61Right-handed alpha
Helix 3
3
A
69 73Right-handed 310
Helix 4
4
A
76 81Right-handed alpha
Helix 5
5
A
104 108Right-handed 310
Helix 6
6
A
112 121Right-handed alpha
Helix 7
7
A
123 127Right-handed 310
Helix 8
8
A
141 146Right-handed alpha
Helix 9
9
A
154 163Right-handed alpha
Helix 10
10
A
181 194Right-handed alpha
Helix 11
11
A
213 233Right-handed alpha
Helix 12
12
A
246 261Right-handed alpha
Helix 13
13
A
269 273Right-handed alpha
Helix 14
14
A
273 288Right-handed alpha
Helix 15
15
A
297 303Right-handed alpha
Helix 16
16
A
310 322Right-handed alpha
Helix 17
17
A
338 351Right-handed alpha
Helix 18
18
A
383 385Right-handed 310
Helix 19
19
A
386 394Right-handed alpha
Helix 20
20
A
403 408Right-handed alpha
Helix 21
21
A
412 433Right-handed alpha
Helix 22
22
A
440 450Right-handed alpha
Helix 23
23
A
452 462Right-handed alpha
Helix 24
24
B
20 25Right-handed alpha
Helix 25
25
B
49 61Right-handed alpha
Helix 26
26
B
69 73Right-handed 310
Helix 27
27
B
76 81Right-handed alpha
Helix 28
28
B
104 108Right-handed 310
Helix 29
29
B
112 122Right-handed alpha
Helix 30
30
B
144 148Right-handed 310
Helix 31
31
B
153 163Right-handed alpha
Helix 32
32
B
181 195Right-handed alpha
Helix 33
33
B
213 233Right-handed alpha
Helix 34
34
B
246 261Right-handed alpha
Helix 35
35
B
269 273Right-handed alpha
Helix 36
36
B
273 287Right-handed alpha
Helix 37
37
B
297 303Right-handed alpha
Helix 38
38
B
310 322Right-handed alpha
Helix 39
39
B
338 351Right-handed alpha
Helix 40
40
B
383 385Right-handed 310
Helix 41
41
B
386 395Right-handed alpha
Helix 42
42
B
403 408Right-handed alpha
Helix 43
43
B
412 434Right-handed alpha
Helix 44
44
B
440 450Right-handed alpha
Helix 45
45
B
452 462Right-handed alpha
Helix 46
46
C
49 61Right-handed alpha
Helix 47
47
C
69 74Right-handed 310
Helix 48
48
C
76 81Right-handed alpha
Helix 49
49
C
104 108Right-handed 310
Helix 50
50
C
112 122Right-handed alpha
Helix 51
51
C
123 127Right-handed 310
Helix 52
52
C
141 146Right-handed alpha
Helix 53
53
C
153 163Right-handed alpha
Helix 54
54
C
181 195Right-handed alpha
Helix 55
55
C
213 233Right-handed alpha
Helix 56
56
C
246 261Right-handed alpha
Helix 57
57
C
269 273Right-handed alpha
Helix 58
58
C
273 287Right-handed alpha
Helix 59
59
C
297 303Right-handed alpha
Helix 60
60
C
310 322Right-handed alpha
Helix 61
61
C
338 351Right-handed alpha
Helix 62
62
C
383 385Right-handed 310
Helix 63
63
C
386 395Right-handed alpha
Helix 64
64
C
403 408Right-handed alpha
Helix 65
65
C
412 433Right-handed alpha
Helix 66
66
C
436 452Right-handed alpha
Helix 67
67
C
452 462Right-handed alpha
Helix 68
68
D
20 25Right-handed alpha
Helix 69
69
D
49 60Right-handed alpha
Helix 70
70
D
69 75Right-handed 310
Helix 71
71
D
76 81Right-handed alpha
Helix 72
72
D
104 108Right-handed 310
Helix 73
73
D
112 122Right-handed alpha
Helix 74
74
D
141 146Right-handed alpha
Helix 75
75
D
154 163Right-handed alpha
Helix 76
76
D
181 194Right-handed alpha
Helix 77
77
D
213 233Right-handed alpha
Helix 78
78
D
246 260Right-handed alpha
Helix 79
79
D
269 273Right-handed alpha
Helix 80
80
D
273 288Right-handed alpha
Helix 81
81
D
297 303Right-handed alpha
Helix 82
82
D
310 322Right-handed alpha
Helix 83
83
D
338 351Right-handed alpha
Helix 84
84
D
383 385Right-handed 310
Helix 85
85
D
386 394Right-handed alpha
Helix 86
86
D
403 408Right-handed alpha
Helix 87
87
D
412 433Right-handed alpha
Helix 88
88
D
440 452Right-handed alpha
Helix 89
89
D
452 462Right-handed alpha
Helix 90
90
S
22 36Right-handed alpha
Helix 91
91
S
80 94Right-handed alpha
Helix 92
92
T
22 37Right-handed alpha
Helix 93
93
T
80 94Right-handed alpha
Helix 94
94
U
24 34Right-handed alpha
Helix 95
95
U
79 94Right-handed alpha
Helix 96
96
V
22 36Right-handed alpha
Helix 97
97
V
80 94Right-handed alpha
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There are 16 sheets in PDB entry 4HHH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 90first strand
Strand 2
A
96 103anti-parallel
Strand 3
A
36 44anti-parallel
Strand 4
A
130 139anti-parallel
Strand 5
A
308 309parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 171first strand
Strand 2
A
399 401parallel
Strand 3
A
375 378parallel
Strand 4
A
325 327parallel
Strand 5
A
290 294parallel
Strand 6
A
264 268parallel
Strand 7
A
237 241parallel
Strand 8
A
199 201parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 354first strand
Strand 2
A
366 367anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 89first strand
Strand 2
B
97 103anti-parallel
Strand 3
B
36 44anti-parallel
Strand 4
B
130 139anti-parallel
Strand 5
B
308 309parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 171first strand
Strand 2
B
399 401parallel
Strand 3
B
375 379parallel
Strand 4
B
325 327parallel
Strand 5
B
290 294parallel
Strand 6
B
264 268parallel
Strand 7
B
237 241parallel
Strand 8
B
199 201parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
353 354first strand
Strand 2
B
366 367anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
83 89first strand
Strand 2
C
97 103anti-parallel
Strand 3
C
36 44anti-parallel
Strand 4
C
130 139anti-parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
169 171first strand
Strand 2
C
399 401parallel
Strand 3
C
375 379parallel
Strand 4
C
325 327parallel
Strand 5
C
290 294parallel
Strand 6
C
264 268parallel
Strand 7
C
237 241parallel
Strand 8
C
199 201parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
353 354first strand
Strand 2
C
366 367anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
83 89first strand
Strand 2
D
97 103anti-parallel
Strand 3
D
36 44anti-parallel
Strand 4
D
130 139anti-parallel
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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
169 171first strand
Strand 2
D
399 401parallel
Strand 3
D
375 378parallel
Strand 4
D
325 327parallel
Strand 5
D
290 294parallel
Strand 6
D
264 268parallel
Strand 7
D
237 241parallel
Strand 8
D
199 201parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
353 354first strand
Strand 2
D
366 367anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
68 70first strand
Strand 2
S
39 45anti-parallel
Strand 3
S
98 104anti-parallel
Strand 4
S
111 118anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
T
68 69first strand
Strand 2
T
39 45anti-parallel
Strand 3
T
98 105anti-parallel
Strand 4
T
110 118anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
68 70first strand
Strand 2
U
39 45anti-parallel
Strand 3
U
98 104anti-parallel
Strand 4
U
114 118anti-parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
68 70first strand
Strand 2
V
39 45anti-parallel
Strand 3
V
98 104anti-parallel
Strand 4
V
111 118anti-parallel
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