Analysis of interatomic Contacts of Structural Units in PDB entry:
4HJF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HJF entry

There is 1 chain in PDB entry 4HJF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 285GLY 547
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4HJF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
285 299Right-handed alpha
Helix 2
2
A
337 348Right-handed alpha
Helix 3
3
A
350 373Right-handed alpha
Helix 4
4
A
394 406Right-handed alpha
Helix 5
5
A
419 424Right-handed alpha
Helix 6
6
A
425 440Right-handed alpha
Helix 7
7
A
453 461Right-handed 310
Helix 8
8
A
469 476Right-handed alpha
Helix 9
9
A
479 497Right-handed alpha
Helix 10
10
A
507 517Right-handed alpha
Helix 11
11
A
532 546Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4HJF.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 336first strand
Strand 2
A
319 330anti-parallel
Strand 3
A
380 384parallel
Strand 4
A
413 418parallel
Strand 5
A
442 446parallel
Strand 6
A
465 468parallel
Strand 7
A
499 503parallel
Strand 8
A
521 523parallel
Strand 9
A
304 313anti-parallel
Strand 10
A
319 330anti-parallel
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