Analysis of interatomic Contacts of Structural Units in PDB entry:
4HJH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HJH entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 4 chains in PDB entry 4HJH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4GLY 103
A
 HIS 105THR 475
B
 ASN 4GLY 103
B
 HIS 105THR 475
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4HJH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 21Right-handed alpha
Helix 2
2
A
22 39Right-handed alpha
Helix 3
3
A
57 72Right-handed alpha
Helix 4
4
A
83 94Right-handed alpha
Helix 5
5
A
123 136Right-handed alpha
Helix 6
6
A
153 168Right-handed alpha
Helix 7
7
A
186 197Right-handed alpha
Helix 8
8
A
219 231Right-handed alpha
Helix 9
9
A
259 271Right-handed alpha
Helix 10
10
A
285 290Right-handed alpha
Helix 11
11
A
299 310Right-handed alpha
Helix 12
12
A
348 363Right-handed alpha
Helix 13
13
A
365 372Right-handed alpha
Helix 14
14
A
387 398Right-handed alpha
Helix 15
15
A
400 408Right-handed alpha
Helix 16
16
A
452 475Right-handed alpha
Helix 17
17
B
17 21Right-handed alpha
Helix 18
18
B
22 39Right-handed alpha
Helix 19
19
B
57 72Right-handed alpha
Helix 20
20
B
83 94Right-handed alpha
Helix 21
21
B
123 136Right-handed alpha
Helix 22
22
B
153 168Right-handed alpha
Helix 23
23
B
186 197Right-handed alpha
Helix 24
24
B
219 231Right-handed alpha
Helix 25
25
B
259 271Right-handed alpha
Helix 26
26
B
285 290Right-handed alpha
Helix 27
27
B
299 310Right-handed alpha
Helix 28
28
B
348 363Right-handed alpha
Helix 29
29
B
365 372Right-handed alpha
Helix 30
30
B
387 399Right-handed alpha
Helix 31
31
B
400 408Right-handed alpha
Helix 32
32
B
452 475Right-handed alpha
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There are 12 sheets in PDB entry 4HJH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 8first strand
Strand 2
A
13 16anti-parallel
Strand 3
A
110 117anti-parallel
Strand 4
A
98 101anti-parallel
Strand 5
A
47 52parallel
Strand 6
A
75 81parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 8first strand
Strand 2
A
13 16anti-parallel
Strand 3
A
110 117anti-parallel
Strand 4
A
120 121anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 206first strand
Strand 2
A
176 182parallel
Strand 3
A
237 241parallel
Strand 4
A
248 251anti-parallel
Strand 5
A
257 258anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 296first strand
Strand 2
A
275 279parallel
Strand 3
A
318 321parallel
Strand 4
A
327 329anti-parallel
Strand 5
A
343 347anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 335first strand
Strand 2
A
338 340anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 384first strand
Strand 2
A
443 450anti-parallel
Strand 3
A
432 437anti-parallel
Strand 4
A
423 427anti-parallel
Strand 5
A
414 418anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 8first strand
Strand 2
B
13 16anti-parallel
Strand 3
B
110 117anti-parallel
Strand 4
B
98 101anti-parallel
Strand 5
B
47 52parallel
Strand 6
B
75 81parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 8first strand
Strand 2
B
13 16anti-parallel
Strand 3
B
110 117anti-parallel
Strand 4
B
120 121anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
200 206first strand
Strand 2
B
176 182parallel
Strand 3
B
237 241parallel
Strand 4
B
248 251anti-parallel
Strand 5
B
257 258anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 296first strand
Strand 2
B
275 279parallel
Strand 3
B
318 321parallel
Strand 4
B
327 329anti-parallel
Strand 5
B
343 347anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
333 335first strand
Strand 2
B
338 340anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
377 383first strand
Strand 2
B
444 450anti-parallel
Strand 3
B
432 437anti-parallel
Strand 4
B
423 427anti-parallel
Strand 5
B
414 418anti-parallel
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