Analysis of interatomic Contacts of Structural Units in PDB entry:
4HJO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HJO entry

There is 1 chain in PDB entry 4HJO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 679ASP 960
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4HJO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
684 686Right-handed 310
Helix 2
2
A
731 745Right-handed alpha
Helix 3
3
A
774 781Right-handed alpha
Helix 4
4
A
786 807Right-handed alpha
Helix 5
5
A
815 817Right-handed 310
Helix 6
6
A
833 838Right-handed alpha
Helix 7
7
A
853 857Right-handed 310
Helix 8
8
A
858 865Right-handed alpha
Helix 9
9
A
868 885Right-handed alpha
Helix 10
10
A
895 897Right-handed 310
Helix 11
11
A
898 905Right-handed alpha
Helix 12
12
A
916 926Right-handed alpha
Helix 13
13
A
930 934Right-handed 310
Helix 14
14
A
936 949Right-handed alpha
Helix 15
15
A
950 955Right-handed alpha
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There are 2 sheets in PDB entry 4HJO. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
681 682first strand
Strand 2
A
755 758parallel
Strand 3
A
762 767anti-parallel
Strand 4
A
716 723anti-parallel
Strand 5
A
700 707anti-parallel
Strand 6
A
688 696anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
772 773first strand
Strand 2
A
819 823anti-parallel
Strand 3
A
826 829anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il