Analysis of interatomic Contacts of Structural Units in PDB entry:
4HK3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HK3 entry

There are 2 chains in PDB entry 4HK3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
J
 GLN 1LYS 227
N
 GLN 1PRO 210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 4HK3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
J
28 30Right-handed 310
Helix 2
2
J
62 65Right-handed 310
Helix 3
3
J
87 91Right-handed 310
Helix 4
4
J
214 217Right-handed 310
Helix 5
5
N
26 30Right-handed 310
Helix 6
6
N
78 82Right-handed 310
Helix 7
7
N
123 129Right-handed alpha
Helix 8
8
N
183 190Right-handed alpha
Back to top of page

There are 13 sheets in PDB entry 4HK3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
3 6first strand
Strand 2
J
18 25anti-parallel
Strand 3
J
78 83anti-parallel
Strand 4
J
68 73anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
10 12first strand
Strand 2
J
120 124parallel
Strand 3
J
92 101anti-parallel
Strand 4
J
32 39anti-parallel
Strand 5
J
46 51anti-parallel
Strand 6
J
58 60anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
10 12first strand
Strand 2
J
120 124parallel
Strand 3
J
92 101anti-parallel
Strand 4
J
115 116anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
133 137first strand
Strand 2
J
152 158anti-parallel
Strand 3
J
189 195anti-parallel
Strand 4
J
176 178anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
133 137first strand
Strand 2
J
152 158anti-parallel
Strand 3
J
189 195anti-parallel
Strand 4
J
182 183anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
148 149first strand
Strand 2
J
197 198anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
166 167first strand
Strand 2
J
208 213anti-parallel
Strand 3
J
218 223anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
9 11first strand
Strand 2
N
103 106parallel
Strand 3
N
84 91anti-parallel
Strand 4
N
33 37anti-parallel
Strand 5
N
44 47anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
9 11first strand
Strand 2
N
103 106parallel
Strand 3
N
84 91anti-parallel
Strand 4
N
96 99anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
18 23first strand
Strand 2
N
69 74anti-parallel
Strand 3
N
61 66anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
116 120first strand
Strand 2
N
133 141anti-parallel
Strand 3
N
174 181anti-parallel
Strand 4
N
161 163anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
116 120first strand
Strand 2
N
133 141anti-parallel
Strand 3
N
174 181anti-parallel
Strand 4
N
167 168anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
155 156first strand
Strand 2
N
147 152anti-parallel
Strand 3
N
193 199anti-parallel
Strand 4
N
202 208anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il