Analysis of interatomic Contacts of Structural Units in PDB entry:
4HLJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HLJ entry

There is 1 chain in PDB entry 4HLJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 660SER 885
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 4HLJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
665 676Right-handed alpha
Helix 2
2
A
718 722Right-handed 310
Helix 3
3
A
802 806Right-handed 310
Helix 4
4
A
879 884Right-handed alpha
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There are 7 sheets in PDB entry 4HLJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
677 680first strand
Strand 2
A
691 698anti-parallel
Strand 3
A
684 685anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
677 680first strand
Strand 2
A
691 698anti-parallel
Strand 3
A
735 738anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
724 728first strand
Strand 2
A
706 713anti-parallel
Strand 3
A
746 755anti-parallel
Strand 4
A
758 759anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
724 728first strand
Strand 2
A
706 713anti-parallel
Strand 3
A
746 755anti-parallel
Strand 4
A
766 769anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
780 786first strand
Strand 2
A
794 799anti-parallel
Strand 3
A
836 839anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
825 831first strand
Strand 2
A
812 819anti-parallel
Strand 3
A
848 856anti-parallel
Strand 4
A
859 860anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
825 831first strand
Strand 2
A
812 819anti-parallel
Strand 3
A
848 856anti-parallel
Strand 4
A
867 869anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il