Analysis of interatomic Contacts of Structural Units in PDB entry:
4HNY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HNY entry

There are 3 chains in PDB entry 4HNY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 54TYR 862
B
 PRO 2ASP 235
C
 LEU 25PRO 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are112 helices in PDB entry 4HNY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
54 68Right-handed alpha
Helix 2
2
A
69 81Right-handed alpha
Helix 3
3
A
90 104Right-handed alpha
Helix 4
4
A
106 120Right-handed alpha
Helix 5
5
A
125 138Right-handed alpha
Helix 6
6
A
140 155Right-handed alpha
Helix 7
7
A
158 172Right-handed alpha
Helix 8
8
A
174 189Right-handed alpha
Helix 9
9
A
194 196Right-handed 310
Helix 10
10
A
197 217Right-handed alpha
Helix 11
11
A
219 234Right-handed alpha
Helix 12
12
A
235 237Right-handed 310
Helix 13
13
A
239 254Right-handed alpha
Helix 14
14
A
256 271Right-handed alpha
Helix 15
15
A
274 286Right-handed alpha
Helix 16
16
A
290 305Right-handed alpha
Helix 17
17
A
308 319Right-handed alpha
Helix 18
18
A
321 339Right-handed alpha
Helix 19
19
A
343 373Right-handed alpha
Helix 20
20
A
379 397Right-handed alpha
Helix 21
21
A
399 414Right-handed alpha
Helix 22
22
A
417 431Right-handed alpha
Helix 23
23
A
433 446Right-handed alpha
Helix 24
24
A
451 465Right-handed alpha
Helix 25
25
A
467 476Right-handed alpha
Helix 26
26
A
490 494Right-handed 310
Helix 27
27
A
496 523Right-handed alpha
Helix 28
28
A
536 572Right-handed alpha
Helix 29
29
A
574 583Right-handed alpha
Helix 30
30
A
584 596Right-handed alpha
Helix 31
31
A
597 600Right-handed 310
Helix 32
32
A
601 629Right-handed alpha
Helix 33
33
A
682 687Right-handed alpha
Helix 34
34
A
690 699Right-handed alpha
Helix 35
35
A
699 707Right-handed alpha
Helix 36
36
A
713 724Right-handed alpha
Helix 37
37
A
726 742Right-handed alpha
Helix 38
38
A
745 759Right-handed alpha
Helix 39
39
A
766 778Right-handed alpha
Helix 40
40
A
779 781Right-handed 310
Helix 41
41
A
796 805Right-handed alpha
Helix 42
42
A
809 819Right-handed alpha
Helix 43
43
A
826 838Right-handed alpha
Helix 44
44
A
842 854Right-handed alpha
Helix 45
45
A
855 858Right-handed 310
Helix 46
46
B
9 22Right-handed 310
Helix 47
47
B
26 28Right-handed 310
Helix 48
48
B
29 40Right-handed alpha
Helix 49
49
B
65 70Right-handed alpha
Helix 50
50
B
122 125Right-handed 310
Helix 51
51
B
128 146Right-handed alpha
Helix 52
52
B
158 167Right-handed alpha
Helix 53
53
B
195 200Right-handed alpha
Helix 54
54
B
201 205Right-handed 310
Helix 55
55
B
223 234Right-handed alpha
Helix 56
56
C
26 30Right-handed alpha
Helix 57
57
C
55 66Right-handed alpha
Helix 58
58
C
69 83Right-handed alpha
Helix 59
59
C
90 104Right-handed alpha
Helix 60
60
C
106 120Right-handed alpha
Helix 61
61
C
126 138Right-handed alpha
Helix 62
62
C
140 155Right-handed alpha
Helix 63
63
C
158 172Right-handed alpha
Helix 64
64
C
174 190Right-handed alpha
Helix 65
65
C
197 217Right-handed alpha
Helix 66
66
C
219 234Right-handed alpha
Helix 67
67
C
235 237Right-handed 310
Helix 68
68
C
239 254Right-handed alpha
Helix 69
69
C
256 271Right-handed alpha
Helix 70
70
C
274 285Right-handed alpha
Helix 71
71
C
290 305Right-handed alpha
Helix 72
72
C
308 314Right-handed alpha
Helix 73
73
C
315 318Right-handed 310
Helix 74
74
C
321 339Right-handed alpha
Helix 75
75
C
343 355Right-handed alpha
Helix 76
76
C
355 373Right-handed alpha
Helix 77
77
C
379 397Right-handed alpha
Helix 78
78
C
399 414Right-handed alpha
Helix 79
79
C
417 431Right-handed alpha
Helix 80
80
C
433 446Right-handed alpha
Helix 81
81
C
451 465Right-handed alpha
Helix 82
82
C
467 487Right-handed alpha
Helix 83
83
C
490 494Right-handed 310
Helix 84
84
C
496 523Right-handed alpha
Helix 85
85
C
538 571Right-handed alpha
Helix 86
86
C
574 583Right-handed alpha
Helix 87
87
C
584 596Right-handed alpha
Helix 88
88
C
597 600Right-handed 310
Helix 89
89
C
601 629Right-handed alpha
Helix 90
90
C
682 688Right-handed alpha
Helix 91
91
C
690 699Right-handed alpha
Helix 92
92
C
699 707Right-handed alpha
Helix 93
93
C
708 712Right-handed 310
Helix 94
94
C
713 724Right-handed alpha
Helix 95
95
C
726 742Right-handed alpha
Helix 96
96
C
745 759Right-handed alpha
Helix 97
97
C
766 782Right-handed alpha
Helix 98
98
C
786 792Right-handed 310
Helix 99
99
C
796 806Right-handed alpha
Helix 100
100
C
809 819Right-handed alpha
Helix 101
101
C
826 838Right-handed alpha
Helix 102
102
C
842 854Right-handed alpha
Helix 103
103
C
855 858Right-handed 310
Helix 104
104
D
9 22Right-handed 310
Helix 105
105
D
30 40Right-handed alpha
Helix 106
106
D
65 71Right-handed alpha
Helix 107
107
D
122 125Right-handed 310
Helix 108
108
D
128 146Right-handed alpha
Helix 109
109
D
158 167Right-handed alpha
Helix 110
110
D
195 200Right-handed alpha
Helix 111
111
D
201 205Right-handed 310
Helix 112
112
D
223 238Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4HNY. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 7first strand
Strand 2
B
45 50anti-parallel
Strand 3
B
90 100anti-parallel
Strand 4
B
112 120anti-parallel
Strand 5
B
149 155parallel
Strand 6
B
187 193anti-parallel
Strand 7
B
172 177anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 7first strand
Strand 2
D
45 50anti-parallel
Strand 3
D
90 100anti-parallel
Strand 4
D
112 120anti-parallel
Strand 5
D
149 155parallel
Strand 6
D
187 193anti-parallel
Strand 7
D
172 177anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il