Analysis of interatomic Contacts of Structural Units in PDB entry:
4HP8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HP8 entry

There are 2 chains in PDB entry 4HP8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3ARG 247
B
 LYS 2ARG 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4HP8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 32Right-handed alpha
Helix 2
2
A
44 54Right-handed alpha
Helix 3
3
A
94 98Right-handed 310
Helix 4
4
A
99 111Right-handed alpha
Helix 5
5
A
111 129Right-handed alpha
Helix 6
6
A
139 143Right-handed 310
Helix 7
7
A
149 171Right-handed alpha
Helix 8
8
A
187 189Right-handed 310
Helix 9
9
A
190 195Right-handed alpha
Helix 10
10
A
196 205Right-handed alpha
Helix 11
11
A
215 226Right-handed alpha
Helix 12
12
A
227 231Right-handed 310
Helix 13
13
A
243 247Right-handed 310
Helix 14
14
B
19 32Right-handed alpha
Helix 15
15
B
44 54Right-handed alpha
Helix 16
16
B
94 98Right-handed 310
Helix 17
17
B
99 111Right-handed alpha
Helix 18
18
B
111 129Right-handed alpha
Helix 19
19
B
139 143Right-handed 310
Helix 20
20
B
149 171Right-handed alpha
Helix 21
21
B
187 189Right-handed 310
Helix 22
22
B
190 195Right-handed alpha
Helix 23
23
B
196 206Right-handed alpha
Helix 24
24
B
214 226Right-handed alpha
Helix 25
25
B
227 231Right-handed 310
Helix 26
26
B
243 247Right-handed 310
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There are 2 sheets in PDB entry 4HP8. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 62first strand
Strand 2
A
35 40parallel
Strand 3
A
11 14parallel
Strand 4
A
82 85parallel
Strand 5
A
132 137parallel
Strand 6
A
175 182parallel
Strand 7
A
237 240parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 62first strand
Strand 2
B
35 40parallel
Strand 3
B
11 14parallel
Strand 4
B
82 85parallel
Strand 5
B
132 137parallel
Strand 6
B
175 182parallel
Strand 7
B
237 240parallel
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