Analysis of interatomic Contacts of Structural Units in PDB entry:
4HQJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HQJ entry

There are 3 chains in PDB entry 4HQJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 32TYR 1016
B
 SER 19SER 303
G
 TYR 21THR 25
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 91 helices in PDB entry 4HQJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 49Right-handed alpha
Helix 2
2
A
57 69Right-handed alpha
Helix 3
3
A
83 91Right-handed alpha
Helix 4
4
A
93 114Right-handed alpha
Helix 5
5
A
123 157Right-handed alpha
Helix 6
6
A
259 261Right-handed 310
Helix 7
7
A
262 267Right-handed alpha
Helix 8
8
A
275 306Right-handed alpha
Helix 9
9
A
309 325Right-handed alpha
Helix 10
10
A
327 347Right-handed alpha
Helix 11
11
A
355 362Right-handed alpha
Helix 12
12
A
408 421Right-handed alpha
Helix 13
13
A
434 438Right-handed 310
Helix 14
14
A
443 457Right-handed alpha
Helix 15
15
A
459 467Right-handed alpha
Helix 16
16
A
503 510Right-handed alpha
Helix 17
17
A
524 540Right-handed alpha
Helix 18
18
A
590 601Right-handed alpha
Helix 19
19
A
613 624Right-handed alpha
Helix 20
20
A
633 641Right-handed alpha
Helix 21
21
A
644 648Right-handed 310
Helix 22
22
A
660 665Right-handed alpha
Helix 23
23
A
667 678Right-handed alpha
Helix 24
24
A
687 699Right-handed alpha
Helix 25
25
A
711 713Right-handed 310
Helix 26
26
A
714 721Right-handed alpha
Helix 27
27
A
732 739Right-handed alpha
Helix 28
28
A
749 789Right-handed alpha
Helix 29
29
A
796 807Right-handed alpha
Helix 30
30
A
808 815Right-handed alpha
Helix 31
31
A
816 818Right-handed 310
Helix 32
32
A
841 848Right-handed alpha
Helix 33
33
A
849 868Right-handed alpha
Helix 34
34
A
872 876Right-handed 310
Helix 35
35
A
879 884Right-handed alpha
Helix 36
36
A
900 931Right-handed alpha
Helix 37
37
A
936 941Right-handed alpha
Helix 38
38
A
944 964Right-handed alpha
Helix 39
39
A
966 971Right-handed alpha
Helix 40
40
A
978 983Right-handed alpha
Helix 41
41
A
984 1005Right-handed alpha
Helix 42
42
B
33 57Right-handed alpha
Helix 43
43
B
94 109Right-handed alpha
Helix 44
44
B
233 235Right-handed 310
Helix 45
45
B
246 251Right-handed alpha
Helix 46
46
G
23 46Right-handed alpha
Helix 47
47
C
40 49Right-handed alpha
Helix 48
48
C
57 69Right-handed alpha
Helix 49
49
C
83 91Right-handed alpha
Helix 50
50
C
93 114Right-handed alpha
Helix 51
51
C
123 157Right-handed alpha
Helix 52
52
C
258 262Right-handed 310
Helix 53
53
C
275 306Right-handed alpha
Helix 54
54
C
309 325Right-handed alpha
Helix 55
55
C
327 347Right-handed alpha
Helix 56
56
C
355 362Right-handed alpha
Helix 57
57
C
408 421Right-handed alpha
Helix 58
58
C
434 438Right-handed 310
Helix 59
59
C
443 457Right-handed alpha
Helix 60
60
C
459 467Right-handed alpha
Helix 61
61
C
503 510Right-handed alpha
Helix 62
62
C
524 540Right-handed alpha
Helix 63
63
C
590 601Right-handed alpha
Helix 64
64
C
613 624Right-handed alpha
Helix 65
65
C
633 641Right-handed alpha
Helix 66
66
C
644 648Right-handed 310
Helix 67
67
C
660 665Right-handed alpha
Helix 68
68
C
667 678Right-handed alpha
Helix 69
69
C
687 699Right-handed alpha
Helix 70
70
C
711 713Right-handed 310
Helix 71
71
C
714 721Right-handed alpha
Helix 72
72
C
732 739Right-handed alpha
Helix 73
73
C
749 789Right-handed alpha
Helix 74
74
C
796 807Right-handed alpha
Helix 75
75
C
808 815Right-handed alpha
Helix 76
76
C
816 818Right-handed 310
Helix 77
77
C
841 848Right-handed alpha
Helix 78
78
C
849 869Right-handed alpha
Helix 79
79
C
872 876Right-handed 310
Helix 80
80
C
879 884Right-handed alpha
Helix 81
81
C
900 931Right-handed alpha
Helix 82
82
C
936 941Right-handed alpha
Helix 83
83
C
944 964Right-handed alpha
Helix 84
84
C
966 971Right-handed alpha
Helix 85
85
C
978 983Right-handed alpha
Helix 86
86
C
984 1005Right-handed alpha
Helix 87
87
D
33 57Right-handed alpha
Helix 88
88
D
94 109Right-handed alpha
Helix 89
89
D
233 235Right-handed 310
Helix 90
90
D
246 251Right-handed alpha
Helix 91
91
E
23 46Right-handed alpha
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There are 20 sheets in PDB entry 4HQJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 174first strand
Strand 2
A
161 166anti-parallel
Strand 3
A
183 185anti-parallel
Strand 4
A
241 253anti-parallel
Strand 5
A
195 207anti-parallel
Strand 6
A
218 219anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 174first strand
Strand 2
A
161 166anti-parallel
Strand 3
A
183 185anti-parallel
Strand 4
A
241 253anti-parallel
Strand 5
A
195 207anti-parallel
Strand 6
A
235 236anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 351first strand
Strand 2
A
741 743anti-parallel
Strand 3
A
723 727parallel
Strand 4
A
705 709parallel
Strand 5
A
365 368parallel
Strand 6
A
605 609parallel
Strand 7
A
680 684parallel
Strand 8
A
655 659parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 392first strand
Strand 2
A
380 386anti-parallel
Strand 3
A
576 585anti-parallel
Strand 4
A
543 552anti-parallel
Strand 5
A
497 502anti-parallel
Strand 6
A
481 486anti-parallel
Strand 7
A
469 476anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 392first strand
Strand 2
A
380 386anti-parallel
Strand 3
A
576 585anti-parallel
Strand 4
A
511 516parallel
Strand 5
A
519 522anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
425 426first strand
Strand 2
A
440 441anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
891 892first strand
Strand 2
A
898 899anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 79first strand
Strand 2
B
176 180anti-parallel
Strand 3
B
258 261anti-parallel
Strand 4
B
229 231anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 90first strand
Strand 2
B
294 301parallel
Strand 3
B
272 277anti-parallel
Strand 4
B
212 215anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 124first strand
Strand 2
B
148 149parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
169 174first strand
Strand 2
C
161 166anti-parallel
Strand 3
C
183 185anti-parallel
Strand 4
C
241 253anti-parallel
Strand 5
C
195 207anti-parallel
Strand 6
C
218 219anti-parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
169 174first strand
Strand 2
C
161 166anti-parallel
Strand 3
C
183 185anti-parallel
Strand 4
C
241 253anti-parallel
Strand 5
C
195 207anti-parallel
Strand 6
C
235 236anti-parallel
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There are 8 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
349 351first strand
Strand 2
C
741 743anti-parallel
Strand 3
C
723 727parallel
Strand 4
C
705 709parallel
Strand 5
C
365 368parallel
Strand 6
C
605 609parallel
Strand 7
C
680 684parallel
Strand 8
C
655 659parallel
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There are 7 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
389 392first strand
Strand 2
C
380 386anti-parallel
Strand 3
C
576 585anti-parallel
Strand 4
C
543 552anti-parallel
Strand 5
C
497 502anti-parallel
Strand 6
C
481 486anti-parallel
Strand 7
C
469 476anti-parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
389 392first strand
Strand 2
C
380 386anti-parallel
Strand 3
C
576 585anti-parallel
Strand 4
C
511 516parallel
Strand 5
C
519 522anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
425 426first strand
Strand 2
C
440 441anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
891 892first strand
Strand 2
C
898 899anti-parallel
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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
77 79first strand
Strand 2
D
176 180anti-parallel
Strand 3
D
258 261anti-parallel
Strand 4
D
229 231anti-parallel
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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
87 90first strand
Strand 2
D
294 301parallel
Strand 3
D
272 277anti-parallel
Strand 4
D
212 215anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
123 124first strand
Strand 2
D
148 149parallel
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