Analysis of interatomic Contacts of Structural Units in PDB entry:
4HQS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HQS entry

There is 1 chain in PDB entry 4HQS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 53LEU 187
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 5 helices in PDB entry 4HQS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
68 71Right-handed 310
Helix 2
2
A
84 100Right-handed alpha
Helix 3
3
A
120 129Right-handed alpha
Helix 4
4
A
144 150Right-handed alpha
Helix 5
5
A
176 187Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 4HQS.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 66first strand
Strand 2
A
56 59anti-parallel
Strand 3
A
138 140anti-parallel
Strand 4
A
105 111parallel
Strand 5
A
74 79parallel
Strand 6
A
157 161anti-parallel
Strand 7
A
167 172anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il