Analysis of interatomic Contacts of Structural Units in PDB entry:
4HR7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HR7 entry

There are 8 chains in PDB entry 4HR7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1LEU 446
B
GLU 77GLU 156
C
MET 1LEU 446
D
SER 79GLU 156
E
MET 1LEU 446
F
MET 1LEU 446
G
GLY 80GLU 156
I
GLY 80GLU 156
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 4HR7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
10 25Right-handed alpha
Helix 2
2
A
35 37Right-handed 310
Helix 3
3
A
39 45Right-handed alpha
Helix 4
4
A
55 59Right-handed 310
Helix 5
5
A
62 74Right-handed alpha
Helix 6
6
A
88 98Right-handed alpha
Helix 7
7
A
106 115Right-handed alpha
Helix 8
8
A
115 127Right-handed alpha
Helix 9
9
A
141 153Right-handed alpha
Helix 10
10
A
174 176Right-handed 310
Helix 11
11
A
177 193Right-handed alpha
Helix 12
12
A
249 268Right-handed alpha
Helix 13
13
A
296 305Right-handed alpha
Helix 14
14
A
307 317Right-handed alpha
Helix 15
15
A
324 328Right-handed 310
Helix 16
16
A
394 409Right-handed alpha
Helix 17
17
A
417 427Right-handed alpha
Helix 18
18
A
427 433Right-handed alpha
Helix 19
19
A
438 444Right-handed alpha
Helix 20
20
C
10 24Right-handed alpha
Helix 21
21
C
35 37Right-handed 310
Helix 22
22
C
39 45Right-handed alpha
Helix 23
23
C
55 59Right-handed 310
Helix 24
24
C
62 74Right-handed alpha
Helix 25
25
C
88 98Right-handed alpha
Helix 26
26
C
106 115Right-handed alpha
Helix 27
27
C
115 127Right-handed alpha
Helix 28
28
C
141 153Right-handed alpha
Helix 29
29
C
174 176Right-handed 310
Helix 30
30
C
177 182Right-handed alpha
Helix 31
31
C
249 268Right-handed alpha
Helix 32
32
C
296 305Right-handed alpha
Helix 33
33
C
307 317Right-handed alpha
Helix 34
34
C
324 328Right-handed 310
Helix 35
35
C
394 409Right-handed alpha
Helix 36
36
C
417 427Right-handed alpha
Helix 37
37
C
427 433Right-handed alpha
Helix 38
38
C
438 444Right-handed alpha
Helix 39
39
E
10 25Right-handed alpha
Helix 40
40
E
39 45Right-handed alpha
Helix 41
41
E
55 59Right-handed 310
Helix 42
42
E
62 74Right-handed alpha
Helix 43
43
E
88 98Right-handed alpha
Helix 44
44
E
106 115Right-handed alpha
Helix 45
45
E
115 127Right-handed alpha
Helix 46
46
E
141 153Right-handed alpha
Helix 47
47
E
174 176Right-handed 310
Helix 48
48
E
177 183Right-handed alpha
Helix 49
49
E
249 268Right-handed alpha
Helix 50
50
E
296 305Right-handed alpha
Helix 51
51
E
307 317Right-handed alpha
Helix 52
52
E
324 328Right-handed 310
Helix 53
53
E
394 409Right-handed alpha
Helix 54
54
E
417 427Right-handed alpha
Helix 55
55
E
427 433Right-handed alpha
Helix 56
56
E
438 444Right-handed alpha
Helix 57
57
F
10 24Right-handed alpha
Helix 58
58
F
35 37Right-handed 310
Helix 59
59
F
39 45Right-handed alpha
Helix 60
60
F
55 59Right-handed 310
Helix 61
61
F
62 74Right-handed alpha
Helix 62
62
F
88 98Right-handed alpha
Helix 63
63
F
106 115Right-handed alpha
Helix 64
64
F
115 127Right-handed alpha
Helix 65
65
F
141 153Right-handed alpha
Helix 66
66
F
174 176Right-handed 310
Helix 67
67
F
177 184Right-handed alpha
Helix 68
68
F
249 268Right-handed alpha
Helix 69
69
F
296 305Right-handed alpha
Helix 70
70
F
307 317Right-handed alpha
Helix 71
71
F
324 328Right-handed 310
Helix 72
72
F
394 409Right-handed alpha
Helix 73
73
F
417 427Right-handed alpha
Helix 74
74
F
427 433Right-handed alpha
Helix 75
75
F
438 444Right-handed alpha
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There are 36 sheets in PDB entry 4HR7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
47 52first strand
Strand 2
A
27 33parallel
Strand 3
A
4 7parallel
Strand 4
A
77 79parallel
Strand 5
A
101 102parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
170 172first strand
Strand 2
A
156 160anti-parallel
Strand 3
A
198 202anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
222 229first strand
Strand 2
A
208 217anti-parallel
Strand 3
A
270 280anti-parallel
Strand 4
A
283 290anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
233 234first strand
Strand 2
A
237 238anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
240 243first strand
Strand 2
A
333 340anti-parallel
Strand 3
A
384 392anti-parallel
Strand 4
A
365 369anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
352 353first strand
Strand 2
A
376 377anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
356 358first strand
Strand 2
A
410 412anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
81 84first strand
Strand 2
B
151 155anti-parallel
Strand 3
B
133 138anti-parallel
Strand 4
B
108 109anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
123 128first strand
Strand 2
B
114 120anti-parallel
Strand 3
B
89 92anti-parallel
Strand 4
B
145 146anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
47 52first strand
Strand 2
C
27 33parallel
Strand 3
C
4 7parallel
Strand 4
C
77 79parallel
Strand 5
C
101 102parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
171 172first strand
Strand 2
C
156 160anti-parallel
Strand 3
C
198 202anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
222 229first strand
Strand 2
C
208 217anti-parallel
Strand 3
C
270 280anti-parallel
Strand 4
C
283 290anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
233 234first strand
Strand 2
C
237 238anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
240 243first strand
Strand 2
C
333 340anti-parallel
Strand 3
C
384 392anti-parallel
Strand 4
C
365 369anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
352 353first strand
Strand 2
C
376 377anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
356 358first strand
Strand 2
C
410 412anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
81 84first strand
Strand 2
D
151 155anti-parallel
Strand 3
D
133 138anti-parallel
Strand 4
D
108 109anti-parallel
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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
123 128first strand
Strand 2
D
114 120anti-parallel
Strand 3
D
89 92anti-parallel
Strand 4
D
145 146anti-parallel
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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
47 52first strand
Strand 2
E
27 33parallel
Strand 3
E
4 7parallel
Strand 4
E
77 79parallel
Strand 5
E
101 102parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
171 172first strand
Strand 2
E
156 158anti-parallel
Strand 3
E
200 202anti-parallel
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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
222 229first strand
Strand 2
E
208 217anti-parallel
Strand 3
E
270 280anti-parallel
Strand 4
E
283 290anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
233 234first strand
Strand 2
E
237 238anti-parallel
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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
240 243first strand
Strand 2
E
333 340anti-parallel
Strand 3
E
384 392anti-parallel
Strand 4
E
365 369anti-parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
352 353first strand
Strand 2
E
376 377anti-parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
356 358first strand
Strand 2
E
410 412anti-parallel
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There are 5 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
47 52first strand
Strand 2
F
27 33parallel
Strand 3
F
4 7parallel
Strand 4
F
77 79parallel
Strand 5
F
101 102parallel
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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
170 172first strand
Strand 2
F
156 159anti-parallel
Strand 3
F
199 202anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
222 229first strand
Strand 2
F
208 217anti-parallel
Strand 3
F
270 280anti-parallel
Strand 4
F
283 290anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
233 234first strand
Strand 2
F
237 238anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
240 243first strand
Strand 2
F
333 340anti-parallel
Strand 3
F
384 392anti-parallel
Strand 4
F
365 369anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
352 353first strand
Strand 2
F
376 377anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
356 358first strand
Strand 2
F
410 412anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
81 84first strand
Strand 2
G
151 155anti-parallel
Strand 3
G
133 138anti-parallel
Strand 4
G
108 109anti-parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
123 128first strand
Strand 2
G
114 120anti-parallel
Strand 3
G
89 92anti-parallel
Strand 4
G
145 146anti-parallel
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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
81 84first strand
Strand 2
I
151 156anti-parallel
Strand 3
I
133 138anti-parallel
Strand 4
I
108 109anti-parallel
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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
123 128first strand
Strand 2
I
114 120anti-parallel
Strand 3
I
89 92anti-parallel
Strand 4
I
145 146anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il