Analysis of interatomic Contacts of Structural Units in PDB entry:
4HRM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HRM entry

There are 4 chains in PDB entry 4HRM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLN 2GLN 191
A
 GLY 6CYS 182
B
 ASP 13LEU 152
D
 LEU 14ALA 169
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 4HRM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
19 29Right-handed alpha
Helix 2
2
C
49 55Right-handed 310
Helix 3
3
C
85 88Right-handed 310
Helix 4
4
C
146 151Right-handed alpha
Helix 5
5
A
16 18Right-handed 310
Helix 6
6
A
19 29Right-handed alpha
Helix 7
7
A
85 88Right-handed 310
Helix 8
8
B
14 19Right-handed alpha
Helix 9
9
B
26 35Right-handed alpha
Helix 10
10
B
49 58Right-handed alpha
Helix 11
11
B
59 69Right-handed alpha
Helix 12
12
B
82 91Right-handed alpha
Helix 13
13
B
92 100Right-handed alpha
Helix 14
14
B
101 103Right-handed 310
Helix 15
15
B
115 121Right-handed alpha
Helix 16
16
B
125 134Right-handed alpha
Helix 17
17
B
148 152Right-handed 310
Helix 18
18
D
15 19Right-handed alpha
Helix 19
19
D
49 55Right-handed alpha
Helix 20
20
D
59 69Right-handed alpha
Helix 21
21
D
82 88Right-handed alpha
Helix 22
22
D
92 101Right-handed alpha
Helix 23
23
D
115 123Right-handed alpha
Helix 24
24
D
125 135Right-handed alpha
Helix 25
25
D
149 155Right-handed alpha
Helix 26
26
D
158 159Right-handed 310
Helix 27
27
D
161 161Right-handed 310
Helix 28
28
D
162 166Right-handed alpha
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There are 4 sheets in PDB entry 4HRM. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 43first strand
Strand 2
C
62 67parallel
Strand 3
C
90 95parallel
Strand 4
C
130 134parallel
Strand 5
C
160 161parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 58first strand
Strand 2
C
79 80parallel
Strand 3
C
125 126parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 41first strand
Strand 2
A
62 65parallel
Strand 3
A
92 95parallel
Strand 4
A
130 134parallel
Strand 5
A
160 161parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
79 80parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il