Analysis of interatomic Contacts of Structural Units in PDB entry:
4HRV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HRV entry

There are 2 chains in PDB entry 4HRV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 35THR 180
B
 PRO 35SER 178
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4HRV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
49 54Right-handed 310
Helix 2
2
A
55 67Right-handed alpha
Helix 3
3
A
73 84Right-handed alpha
Helix 4
4
A
88 95Right-handed alpha
Helix 5
5
A
96 105Right-handed alpha
Helix 6
6
A
160 178Right-handed alpha
Helix 7
7
B
49 54Right-handed 310
Helix 8
8
B
55 60Right-handed alpha
Helix 9
9
B
60 67Right-handed alpha
Helix 10
10
B
73 84Right-handed alpha
Helix 11
11
B
88 95Right-handed alpha
Helix 12
12
B
96 105Right-handed alpha
Helix 13
13
B
157 159Right-handed 310
Helix 14
14
B
160 177Right-handed alpha
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There are 2 sheets in PDB entry 4HRV. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
108 118parallel
Strand 3
A
128 138anti-parallel
Strand 4
A
144 154anti-parallel
Strand 5
B
144 155anti-parallel
Strand 6
B
126 138anti-parallel
Strand 7
B
108 121anti-parallel
Strand 8
B
44 45parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
37 40parallel
Strand 3
A
108 118parallel
Strand 4
A
128 138anti-parallel
Strand 5
A
144 154anti-parallel
Strand 6
B
144 155anti-parallel
Strand 7
B
126 138anti-parallel
Strand 8
B
108 121anti-parallel
Strand 9
B
37 40parallel
Strand 10
B
70 71parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il