Analysis of interatomic Contacts of Structural Units in PDB entry:
4HVK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HVK entry

There is 1 chain in PDB entry 4HVK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2PRO 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4HVK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 26Right-handed alpha
Helix 2
2
A
35 56Right-handed alpha
Helix 3
3
A
68 85Right-handed alpha
Helix 4
4
A
86 88Right-handed 310
Helix 5
5
A
98 111Right-handed alpha
Helix 6
6
A
127 135Right-handed alpha
Helix 7
7
A
156 165Right-handed alpha
Helix 8
8
A
184 189Right-handed alpha
Helix 9
9
A
198 201Right-handed 310
Helix 10
10
A
226 230Right-handed 310
Helix 11
11
A
236 273Right-handed alpha
Helix 12
12
A
300 311Right-handed alpha
Helix 13
13
A
329 335Right-handed alpha
Helix 14
14
A
338 344Right-handed alpha
Helix 15
15
A
355 376Right-handed alpha
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There are 2 sheets in PDB entry 4HVK. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 66first strand
Strand 2
A
207 212anti-parallel
Strand 3
A
192 196anti-parallel
Strand 4
A
169 173parallel
Strand 5
A
139 143parallel
Strand 6
A
90 94parallel
Strand 7
A
114 118parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 280first strand
Strand 2
A
291 296anti-parallel
Strand 3
A
345 349anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il