Analysis of interatomic Contacts of Structural Units in PDB entry:
4HW8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HW8 entry

There are 2 chains in PDB entry 4HW8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 40PRO 415
B
 LYS 40PRO 415
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 4HW8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 71Right-handed alpha
Helix 2
2
A
83 92Right-handed alpha
Helix 3
3
A
93 95Right-handed 310
Helix 4
4
A
107 114Right-handed alpha
Helix 5
5
A
123 128Right-handed alpha
Helix 6
6
A
131 138Right-handed alpha
Helix 7
7
A
169 181Right-handed alpha
Helix 8
8
A
196 205Right-handed alpha
Helix 9
9
A
228 244Right-handed alpha
Helix 10
10
A
252 262Right-handed alpha
Helix 11
11
A
274 283Right-handed alpha
Helix 12
12
A
316 327Right-handed alpha
Helix 13
13
A
329 341Right-handed alpha
Helix 14
14
A
353 363Right-handed alpha
Helix 15
15
A
372 377Right-handed 310
Helix 16
16
A
378 391Right-handed alpha
Helix 17
17
A
394 414Right-handed alpha
Helix 18
18
B
52 71Right-handed alpha
Helix 19
19
B
80 92Right-handed alpha
Helix 20
20
B
107 114Right-handed alpha
Helix 21
21
B
123 128Right-handed alpha
Helix 22
22
B
131 138Right-handed alpha
Helix 23
23
B
169 181Right-handed alpha
Helix 24
24
B
196 205Right-handed alpha
Helix 25
25
B
228 244Right-handed alpha
Helix 26
26
B
252 263Right-handed alpha
Helix 27
27
B
274 283Right-handed alpha
Helix 28
28
B
316 328Right-handed alpha
Helix 29
29
B
329 341Right-handed alpha
Helix 30
30
B
353 364Right-handed alpha
Helix 31
31
B
372 377Right-handed 310
Helix 32
32
B
378 391Right-handed alpha
Helix 33
33
B
394 414Right-handed alpha
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There are 14 sheets in PDB entry 4HW8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 50first strand
Strand 2
A
73 78parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 104first strand
Strand 2
A
302 311anti-parallel
Strand 3
A
146 152anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
302 311anti-parallel
Strand 3
A
367 368parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
A
143 144anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 191first strand
Strand 2
A
265 270parallel
Strand 3
A
155 159anti-parallel
Strand 4
A
286 289anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 214first strand
Strand 2
A
219 224anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 294first strand
Strand 2
A
297 298anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 50first strand
Strand 2
B
73 78parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 104first strand
Strand 2
B
302 311anti-parallel
Strand 3
B
146 152anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
117 118first strand
Strand 2
B
302 311anti-parallel
Strand 3
B
367 368parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 140first strand
Strand 2
B
143 144anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
188 191first strand
Strand 2
B
265 270parallel
Strand 3
B
155 159anti-parallel
Strand 4
B
286 289anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
212 214first strand
Strand 2
B
219 224anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 294first strand
Strand 2
B
297 298anti-parallel
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