Analysis of interatomic Contacts of Structural Units in PDB entry:
4HWV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HWV entry

There are 2 chains in PDB entry 4HWV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 15HIS 512
B
 MET 15ALA 501
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 34 helices in PDB entry 4HWV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 26Right-handed 310
Helix 2
2
A
38 43Right-handed 310
Helix 3
3
A
54 56Right-handed 310
Helix 4
4
A
63 72Right-handed alpha
Helix 5
5
A
113 120Right-handed alpha
Helix 6
6
A
121 126Right-handed alpha
Helix 7
7
A
131 144Right-handed alpha
Helix 8
8
A
144 149Right-handed alpha
Helix 9
9
A
156 173Right-handed alpha
Helix 10
10
A
264 268Right-handed 310
Helix 11
11
A
283 287Right-handed 310
Helix 12
12
A
408 411Right-handed 310
Helix 13
13
A
418 429Right-handed alpha
Helix 14
14
A
430 435Right-handed alpha
Helix 15
15
A
451 460Right-handed alpha
Helix 16
16
A
469 473Right-handed 310
Helix 17
17
A
483 492Right-handed alpha
Helix 18
18
A
506 511Right-handed 310
Helix 19
19
B
38 43Right-handed 310
Helix 20
20
B
54 56Right-handed 310
Helix 21
21
B
63 72Right-handed alpha
Helix 22
22
B
113 120Right-handed alpha
Helix 23
23
B
121 126Right-handed alpha
Helix 24
24
B
131 144Right-handed alpha
Helix 25
25
B
144 149Right-handed alpha
Helix 26
26
B
156 173Right-handed alpha
Helix 27
27
B
264 268Right-handed 310
Helix 28
28
B
283 287Right-handed 310
Helix 29
29
B
408 411Right-handed 310
Helix 30
30
B
418 429Right-handed alpha
Helix 31
31
B
430 435Right-handed alpha
Helix 32
32
B
451 460Right-handed alpha
Helix 33
33
B
469 473Right-handed 310
Helix 34
34
B
483 492Right-handed alpha
Back to top of page

There are 14 sheets in PDB entry 4HWV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 61first strand
Strand 2
A
93 97parallel
Strand 3
A
181 185parallel
Strand 4
A
206 212parallel
Strand 5
A
248 254parallel
Strand 6
A
302 307parallel
Strand 7
A
338 341parallel
Strand 8
A
359 363parallel
Strand 9
A
390 394parallel
Strand 10
A
437 441parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 78first strand
Strand 2
A
84 85anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 102first strand
Strand 2
A
191 193parallel
Strand 3
A
215 217parallel
Strand 4
A
257 259parallel
Strand 5
A
310 316parallel
Strand 6
A
344 350parallel
Strand 7
A
366 370parallel
Strand 8
A
397 401parallel
Strand 9
A
444 445parallel
Strand 10
A
448 449anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 177first strand
Strand 2
A
196 199parallel
Strand 3
A
243 245parallel
Strand 4
A
295 297parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 227first strand
Strand 2
A
235 237anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 276first strand
Strand 2
A
279 280anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 320first strand
Strand 2
A
354 355parallel
Strand 3
A
383 385parallel
Strand 4
A
413 415parallel
Back to list of sheets
Back to top of page

There are 10 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 61first strand
Strand 2
B
93 97parallel
Strand 3
B
181 185parallel
Strand 4
B
206 212parallel
Strand 5
B
248 254parallel
Strand 6
B
302 307parallel
Strand 7
B
338 341parallel
Strand 8
B
359 363parallel
Strand 9
B
390 394parallel
Strand 10
B
437 441parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 78first strand
Strand 2
B
84 85anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 102first strand
Strand 2
B
191 193parallel
Strand 3
B
215 217parallel
Strand 4
B
257 259parallel
Strand 5
B
310 316parallel
Strand 6
B
344 350parallel
Strand 7
B
366 370parallel
Strand 8
B
397 401parallel
Strand 9
B
444 445parallel
Strand 10
B
448 449anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 177first strand
Strand 2
B
196 199parallel
Strand 3
B
243 245parallel
Strand 4
B
295 297parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 227first strand
Strand 2
B
235 237anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
275 276first strand
Strand 2
B
279 280anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
319 320first strand
Strand 2
B
354 355parallel
Strand 3
B
383 385parallel
Strand 4
B
413 415parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il