Analysis of interatomic Contacts of Structural Units in PDB entry:
4HY3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HY3 entry

There are 4 chains in PDB entry 4HY3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 6VAL 332
B
 ARG 6SER 333
C
 PRO 7PRO 321
D
 GLU 5ARG 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 4HY3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 22Right-handed alpha
Helix 2
2
A
23 34Right-handed alpha
Helix 3
3
A
40 47Right-handed 310
Helix 4
4
A
50 54Right-handed alpha
Helix 5
5
A
65 70Right-handed alpha
Helix 6
6
A
92 97Right-handed alpha
Helix 7
7
A
104 107Right-handed 310
Helix 8
8
A
108 125Right-handed alpha
Helix 9
9
A
128 137Right-handed alpha
Helix 10
10
A
163 174Right-handed alpha
Helix 11
11
A
188 195Right-handed alpha
Helix 12
12
A
201 208Right-handed alpha
Helix 13
13
A
227 233Right-handed alpha
Helix 14
14
A
245 249Right-handed 310
Helix 15
15
A
250 260Right-handed alpha
Helix 16
16
A
279 283Right-handed 310
Helix 17
17
A
297 317Right-handed alpha
Helix 18
18
B
23 29Right-handed alpha
Helix 19
19
B
48 55Right-handed alpha
Helix 20
20
B
65 70Right-handed alpha
Helix 21
21
B
92 97Right-handed alpha
Helix 22
22
B
105 107Right-handed 310
Helix 23
23
B
108 126Right-handed alpha
Helix 24
24
B
126 137Right-handed alpha
Helix 25
25
B
141 146Right-handed 310
Helix 26
26
B
163 174Right-handed alpha
Helix 27
27
B
175 177Right-handed 310
Helix 28
28
B
188 194Right-handed alpha
Helix 29
29
B
201 208Right-handed alpha
Helix 30
30
B
228 234Right-handed alpha
Helix 31
31
B
245 249Right-handed 310
Helix 32
32
B
250 261Right-handed alpha
Helix 33
33
B
279 284Right-handed 310
Helix 34
34
B
297 318Right-handed alpha
Helix 35
35
C
23 32Right-handed alpha
Helix 36
36
C
65 71Right-handed alpha
Helix 37
37
C
91 96Right-handed alpha
Helix 38
38
C
105 107Right-handed 310
Helix 39
39
C
108 126Right-handed alpha
Helix 40
40
C
126 136Right-handed alpha
Helix 41
41
C
163 173Right-handed alpha
Helix 42
42
C
174 177Right-handed 310
Helix 43
43
C
188 195Right-handed alpha
Helix 44
44
C
201 207Right-handed alpha
Helix 45
45
C
227 234Right-handed alpha
Helix 46
46
C
250 260Right-handed alpha
Helix 47
47
C
279 284Right-handed 310
Helix 48
48
C
297 316Right-handed alpha
Helix 49
49
D
17 22Right-handed alpha
Helix 50
50
D
23 34Right-handed alpha
Helix 51
51
D
40 47Right-handed 310
Helix 52
52
D
48 53Right-handed alpha
Helix 53
53
D
65 71Right-handed alpha
Helix 54
54
D
92 97Right-handed alpha
Helix 55
55
D
105 107Right-handed 310
Helix 56
56
D
108 126Right-handed alpha
Helix 57
57
D
126 137Right-handed alpha
Helix 58
58
D
145 149Right-handed 310
Helix 59
59
D
163 173Right-handed alpha
Helix 60
60
D
174 177Right-handed 310
Helix 61
61
D
188 194Right-handed alpha
Helix 62
62
D
201 208Right-handed alpha
Helix 63
63
D
227 234Right-handed alpha
Helix 64
64
D
245 249Right-handed 310
Helix 65
65
D
250 260Right-handed alpha
Helix 66
66
D
279 283Right-handed 310
Helix 67
67
D
297 317Right-handed alpha
Helix 68
68
D
328 334Right-handed alpha
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There are 9 sheets in PDB entry 4HY3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 38first strand
Strand 2
A
8 12parallel
Strand 3
A
55 60parallel
Strand 4
A
77 79parallel
Strand 5
A
100 103parallel
Strand 6
A
325 326anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 199first strand
Strand 2
A
179 183parallel
Strand 3
A
156 160parallel
Strand 4
A
211 214parallel
Strand 5
A
239 242parallel
Strand 6
A
264 267parallel
Strand 7
A
287 289parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 38first strand
Strand 2
B
8 12parallel
Strand 3
B
57 60parallel
Strand 4
B
77 80parallel
Strand 5
B
100 103parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 199first strand
Strand 2
B
179 183parallel
Strand 3
B
156 160parallel
Strand 4
B
211 214parallel
Strand 5
B
239 242parallel
Strand 6
B
264 267parallel
Strand 7
B
287 289parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
59 60parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 80first strand
Strand 2
C
100 103parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
198 199first strand
Strand 2
C
180 183parallel
Strand 3
C
157 160parallel
Strand 4
C
211 214parallel
Strand 5
C
239 242parallel
Strand 6
C
264 267parallel
Strand 7
C
287 289parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 38first strand
Strand 2
D
8 12parallel
Strand 3
D
55 60parallel
Strand 4
D
77 80parallel
Strand 5
D
100 103parallel
Strand 6
D
325 326anti-parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
198 199first strand
Strand 2
D
179 183parallel
Strand 3
D
156 160parallel
Strand 4
D
211 214parallel
Strand 5
D
239 242parallel
Strand 6
D
264 267parallel
Strand 7
D
287 289parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il