Analysis of interatomic Contacts of Structural Units in PDB entry:
4HZH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HZH entry

There are 2 chains in PDB entry 4HZH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 169GLU 579
B
 GLY 68GLU 579
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4HZH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
196 201Right-handed alpha
Helix 2
2
A
282 287Right-handed alpha
Helix 3
3
A
289 293Right-handed 310
Helix 4
4
A
361 364Right-handed 310
Helix 5
5
A
375 377Right-handed 310
Helix 6
6
A
442 453Right-handed alpha
Helix 7
7
A
462 468Right-handed alpha
Helix 8
8
A
489 497Right-handed alpha
Helix 9
9
A
565 578Right-handed alpha
Helix 10
10
B
172 176Right-handed 310
Helix 11
11
B
289 293Right-handed 310
Helix 12
12
B
308 314Right-handed 310
Helix 13
13
B
375 377Right-handed 310
Helix 14
14
B
442 449Right-handed alpha
Helix 15
15
B
489 497Right-handed alpha
Helix 16
16
B
566 578Right-handed alpha
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There are 10 sheets in PDB entry 4HZH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
230 233anti-parallel
Strand 3
A
240 242anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 326first strand
Strand 2
A
481 482anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 340first strand
Strand 2
A
345 352anti-parallel
Strand 3
A
357 360anti-parallel
Strand 4
A
421 425anti-parallel
Strand 5
A
399 406anti-parallel
Strand 6
A
379 383anti-parallel
Strand 7
A
335 340anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 367first strand
Strand 2
A
372 373anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 485first strand
Strand 2
A
456 458anti-parallel
Strand 3
A
528 532anti-parallel
Strand 4
A
539 545anti-parallel
Strand 5
A
558 562anti-parallel
Strand 6
A
505 508anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 130first strand
Strand 2
B
133 136anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 233first strand
Strand 2
B
239 242anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
397 399first strand
Strand 2
B
379 383anti-parallel
Strand 3
B
335 340anti-parallel
Strand 4
B
346 352anti-parallel
Strand 5
B
357 360anti-parallel
Strand 6
B
421 425anti-parallel
Strand 7
B
401 406anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
366 367first strand
Strand 2
B
372 373anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
482 486first strand
Strand 2
B
455 459anti-parallel
Strand 3
B
528 532anti-parallel
Strand 4
B
539 545anti-parallel
Strand 5
B
560 562anti-parallel
Strand 6
B
505 506anti-parallel
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