Analysis of interatomic Contacts of Structural Units in PDB entry:
4I3L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4I3L entry

There are 2 chains in PDB entry 4I3L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4GLN 411
B
 LYS 4GLN 411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 4I3L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 31Right-handed alpha
Helix 2
2
A
45 52Right-handed alpha
Helix 3
3
A
54 68Right-handed alpha
Helix 4
4
A
79 87Right-handed alpha
Helix 5
5
A
94 104Right-handed alpha
Helix 6
6
A
186 204Right-handed alpha
Helix 7
7
A
219 235Right-handed alpha
Helix 8
8
A
235 241Right-handed alpha
Helix 9
9
A
251 255Right-handed alpha
Helix 10
10
A
312 321Right-handed alpha
Helix 11
11
A
329 347Right-handed alpha
Helix 12
12
A
349 368Right-handed alpha
Helix 13
13
A
373 382Right-handed alpha
Helix 14
14
A
383 386Right-handed 310
Helix 15
15
A
387 391Right-handed 310
Helix 16
16
A
393 411Right-handed alpha
Helix 17
17
B
16 31Right-handed alpha
Helix 18
18
B
45 52Right-handed alpha
Helix 19
19
B
54 68Right-handed alpha
Helix 20
20
B
79 86Right-handed alpha
Helix 21
21
B
94 104Right-handed alpha
Helix 22
22
B
186 203Right-handed alpha
Helix 23
23
B
217 235Right-handed alpha
Helix 24
24
B
250 254Right-handed 310
Helix 25
25
B
312 322Right-handed alpha
Helix 26
26
B
329 348Right-handed alpha
Helix 27
27
B
349 369Right-handed alpha
Helix 28
28
B
373 382Right-handed alpha
Helix 29
29
B
383 386Right-handed 310
Helix 30
30
B
387 391Right-handed 310
Helix 31
31
B
393 411Right-handed alpha
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There are 4 sheets in PDB entry 4I3L. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 43first strand
Strand 2
A
5 14parallel
Strand 3
A
69 72parallel
Strand 4
A
303 307parallel
Strand 5
A
291 296anti-parallel
Strand 6
A
109 111anti-parallel
Strand 7
A
128 131anti-parallel
Strand 8
A
265 269parallel
Strand 9
A
207 211parallel
Strand 10
A
246 250parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 146first strand
Strand 2
A
177 185anti-parallel
Strand 3
B
177 185anti-parallel
Strand 4
B
142 146anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 172first strand
Strand 2
A
150 158anti-parallel
Strand 3
B
150 158anti-parallel
Strand 4
B
166 172anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 43first strand
Strand 2
B
5 14parallel
Strand 3
B
69 72parallel
Strand 4
B
303 307parallel
Strand 5
B
291 296anti-parallel
Strand 6
B
106 111anti-parallel
Strand 7
B
128 131anti-parallel
Strand 8
B
265 268parallel
Strand 9
B
207 209parallel
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